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WormBase Tree Display for Variation: WBVar00038473

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Name Class

WBVar00038473NamePublic_nameWBVar00038473
Other_namehaw38817
haw140408
cewivar00193756
Y82E9BR.14.1:c.648A>T
CE27038:p.Thr216=
HGVSgCHROMOSOME_III:g.1409577T>A
Sequence_detailsSMapS_parentSequenceY82E9BR
Flanking_sequencestcttctcaatataataatccaccaggtcttcacgttaagccggaaattgt
Mapping_targetY82E9BR
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00006622From_analysisMillion_mutation_project_reanalysis
WBStrain00006642From_analysisWGS_De_Bono
WBStrain00006643From_analysisMillion_mutation_project_reanalysis
WBStrain00006645From_analysisMillion_mutation_project_reanalysis
WBStrain00022852From_analysisMillion_mutation_project_reanalysis
WBStrain00022856From_analysisMillion_mutation_project_reanalysis
WBStrain00022878From_analysisMillion_mutation_project_reanalysis
WBStrain00027647From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01256886
WBVar00560273
StatusLive
AffectsGeneWBGene00022347
TranscriptY82E9BR.14.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY82E9BR.14.1:c.648A>T
HGVSpCE27038:p.Thr216=
cDNA_position648
CDS_position648
Protein_position216
Exon_number4/5
Codon_changeacA/acT
Amino_acid_changeT
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw38817
MethodWGS_Hawaiian_Waterston