WormBase Tree Display for Variation: WBVar00037963
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WBVar00037963 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00037963 | |||
Other_name | haw38715 | ||||
haw140344 | |||||
cewivar00193524 | |||||
Y82E9BR.25.1:c.736-7G>A | |||||
Y82E9BR.5.3:c.-12-219C>T | |||||
Y82E9BR.5.2:c.-12-219C>T | |||||
Y82E9BR.5.1:c.-12-219C>T | |||||
HGVSg | CHROMOSOME_III:g.1387236C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y82E9BR | |
Flanking_sequences | ccattttggacgcgataccctgcaa | tttcacttaaaaaaaaaaatatata | |||
Mapping_target | Y82E9BR | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00560209 | |||
Status | Live | ||||
Affects | Gene | WBGene00022338 | |||
WBGene00194746 | |||||
Transcript | Y82E9BR.5.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y82E9BR.5.2:c.-12-219C>T | ||||
Intron_number | 1/4 | ||||
Y82E9BR.25.1 | VEP_consequence | splice_region_variant,intron_variant | |||
VEP_impact | LOW | ||||
HGVSc | Y82E9BR.25.1:c.736-7G>A | ||||
Intron_number | 5/5 | ||||
Y82E9BR.5.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y82E9BR.5.1:c.-12-219C>T | ||||
Intron_number | 1/4 | ||||
Y82E9BR.5.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y82E9BR.5.3:c.-12-219C>T | ||||
Intron_number | 2/5 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw38715 | ||||
Method | WGS_Hawaiian_Waterston |