WormBase Tree Display for Variation: WBVar00034525
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WBVar00034525 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00034525 | |||
Other_name | haw88003 | ||||
haw173517 | |||||
cewivar00251286 | |||||
CE35617:p.Ser258= | |||||
T13F3.3.2:c.774G>A | |||||
T13F3.3.1:c.774G>A | |||||
HGVSg | CHROMOSOME_V:g.16263547G>A | ||||
Sequence_details | SMap | S_parent | Sequence | T13F3 | |
Flanking_sequences | cagcaagcccgaagaaaagtgaatc | attaagaagaagctggaattgtcat | |||
Mapping_target | T13F3 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00593382 | |||
Status | Live | ||||
Affects | Gene | WBGene00003717 | |||
Transcript | T13F3.3.2 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | T13F3.3.2:c.774G>A | ||||
HGVSp | CE35617:p.Ser258= | ||||
cDNA_position | 1422 | ||||
CDS_position | 774 | ||||
Protein_position | 258 | ||||
Exon_number | 7/9 | ||||
Codon_change | tcG/tcA | ||||
Amino_acid_change | S | ||||
T13F3.3.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | T13F3.3.1:c.774G>A | ||||
HGVSp | CE35617:p.Ser258= | ||||
cDNA_position | 1503 | ||||
CDS_position | 774 | ||||
Protein_position | 258 | ||||
Exon_number | 8/10 | ||||
Codon_change | tcG/tcA | ||||
Amino_acid_change | S | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw88003 | ||||
Method | WGS_Hawaiian_Waterston |