WormBase Tree Display for Variation: WBVar00033345
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WBVar00033345 | Name | Public_name | WBVar00033345 | ||
---|---|---|---|---|---|
Other_name | haw87767 | ||||
cewivar00250755 | |||||
F21H7.2.2:c.1392G>A | |||||
F21H7.2.1:c.1392G>A | |||||
CE15875:p.Thr464= | |||||
HGVSg | CHROMOSOME_V:g.16227336C>T | ||||
Sequence_details | SMap | S_parent | Sequence | F11A5 | |
Flanking_sequences | atgcaaaccttttgtaaacagtagt | gttgtcggaagcttgaaagacacag | |||
Mapping_target | F11A5 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00009028 | |||
Transcript | F21H7.2.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F21H7.2.1:c.1392G>A | ||||
HGVSp | CE15875:p.Thr464= | ||||
cDNA_position | 1497 | ||||
CDS_position | 1392 | ||||
Protein_position | 464 | ||||
Exon_number | 12/14 | ||||
Codon_change | acG/acA | ||||
Amino_acid_change | T | ||||
F21H7.2.2 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | F21H7.2.2:c.1392G>A | ||||
HGVSp | CE15875:p.Thr464= | ||||
cDNA_position | 1772 | ||||
CDS_position | 1392 | ||||
Protein_position | 464 | ||||
Exon_number | 13/15 | ||||
Codon_change | acG/acA | ||||
Amino_acid_change | T | ||||
Remark | [20081124 db] this Variation was previously named hw87767 | ||||
Method | WGS_Hawaiian_Waterston |