WormBase Tree Display for Variation: WBVar00032005
expand all nodes | collapse all nodes | view schema
| WBVar00032005 | Name | Public_name | WBVar00032005 | ||
|---|---|---|---|---|---|
| Other_name | haw87499 | ||||
| cewivar00249988 | |||||
| CE16228:p.Cys152= | |||||
| K05D4.2.1:c.456C>T | |||||
| HGVSg | CHROMOSOME_V:g.16181255C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | K05D4 | |
| Flanking_sequences | atttttctatctggttttattgctg | tatatttggaatggttcaaatgata | |||
| Mapping_target | K05D4 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006159 | |||
| Transcript | K05D4.2.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | K05D4.2.1:c.456C>T | ||||
| HGVSp | CE16228:p.Cys152= | ||||
| cDNA_position | 456 | ||||
| CDS_position | 456 | ||||
| Protein_position | 152 | ||||
| Exon_number | 3/4 | ||||
| Codon_change | tgC/tgT | ||||
| Amino_acid_change | C | ||||
| Remark | [20081124 db] this Variation was previously named hw87499 | ||||
| Method | WGS_Hawaiian_Waterston |
