WormBase Tree Display for Variation: WBVar00029790
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WBVar00029790 | Name | Public_name | WBVar00029790 | ||
---|---|---|---|---|---|
Other_name | haw87056 | ||||
cewivar00249322 | |||||
T10C6.6e.1:c.45-205G>C | |||||
T10C6.6d.1:c.-151-205G>C | |||||
T10C6.6c.1:c.45-205G>C | |||||
T10C6.6f.1:c.57-205G>C | |||||
T10C6.6b.1:c.-151-205G>C | |||||
T10C6.6a.2:c.57-205G>C | |||||
T10C6.6a.1:c.57-205G>C | |||||
HGVSg | CHROMOSOME_V:g.16024734G>C | ||||
Sequence_details | SMap | S_parent | Sequence | T10C6 | |
Flanking_sequences | tatttcatagataaataagaaaaac | accgccgcaaaattgaaaaaaacga | |||
Mapping_target | T10C6 | ||||
Type_of_mutation | Substitution | G | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00011688 | |||
Transcript | T10C6.6c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T10C6.6c.1:c.45-205G>C | ||||
Intron_number | 1/4 | ||||
T10C6.6a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T10C6.6a.1:c.57-205G>C | ||||
Intron_number | 2/6 | ||||
T10C6.6d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T10C6.6d.1:c.-151-205G>C | ||||
Intron_number | 1/7 | ||||
T10C6.6b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T10C6.6b.1:c.-151-205G>C | ||||
Intron_number | 1/6 | ||||
T10C6.6a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T10C6.6a.2:c.57-205G>C | ||||
Intron_number | 1/5 | ||||
T10C6.6f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T10C6.6f.1:c.57-205G>C | ||||
Intron_number | 1/5 | ||||
T10C6.6e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T10C6.6e.1:c.45-205G>C | ||||
Intron_number | 1/5 | ||||
Remark | [20081124 db] this Variation was previously named hw87056 | ||||
Method | WGS_Hawaiian_Waterston |