WormBase Tree Display for Variation: WBVar00028998

WBVar00028998 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00028998
    Other_name: haw36922
      cewivar00146322
      W10C4.1.1:c.*147G>A
      F40G9.17.2:c.*13+952C>T
      F40G9.17.1:c.*965C>T
    HGVSg: CHROMOSOME_III:g.201189C>T
  Sequence_details: SMap: S_parent: Sequence: W10C4
    Flanking_sequences: acgaaaaatttttttttttttcaat aaaattatgataaaacagagagaga
    Mapping_target: W10C4
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004600 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
      WBStrain00023191 From_analysis: Million_mutation_project_reanalysis
      WBStrain00027647 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01388759
    Status: Live
  Affects: Gene: WBGene00185078
      WBGene00021124
    Transcript: F40G9.17.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F40G9.17.2:c.*13+952C>T
        Intron_number: 7/7
      F40G9.17.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F40G9.17.1:c.*965C>T
        cDNA_position: 1688
        Exon_number: 6/6
      W10C4.1.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: W10C4.1.1:c.*147G>A
        cDNA_position: 1375
        Exon_number: 10/10
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw36922
  Method: WGS_Hawaiian_Waterston