WormBase Tree Display for Variation: WBVar00028375
expand all nodes | collapse all nodes | view schema
WBVar00028375 | Name | Public_name | WBVar00028375 | ||
---|---|---|---|---|---|
Other_name | haw86773 | ||||
cewivar00248788 | |||||
CE48057:p.Leu294= | |||||
F36G9.3a.1:c.882G>C | |||||
CE42885:p.Leu294= | |||||
F36G9.3b.1:c.882G>C | |||||
HGVSg | CHROMOSOME_V:g.15958724G>C | ||||
Sequence_details | SMap | S_parent | Sequence | F36G9 | |
Flanking_sequences | ttcggaagctaggtcgtgactatct | attctgttcgcaacttttattcatc | |||
Mapping_target | F36G9 | ||||
Type_of_mutation | Substitution | G | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00009485 | |||
Transcript | F36G9.3a.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | F36G9.3a.1:c.882G>C | ||||
HGVSp | CE42885:p.Leu294= | ||||
cDNA_position | 898 | ||||
CDS_position | 882 | ||||
Protein_position | 294 | ||||
Exon_number | 8/11 | ||||
Codon_change | ctG/ctC | ||||
Amino_acid_change | L | ||||
F36G9.3b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | F36G9.3b.1:c.882G>C | ||||
HGVSp | CE48057:p.Leu294= | ||||
cDNA_position | 906 | ||||
CDS_position | 882 | ||||
Protein_position | 294 | ||||
Exon_number | 8/11 | ||||
Codon_change | ctG/ctC | ||||
Amino_acid_change | L | ||||
Remark | [20081124 db] this Variation was previously named hw86773 | ||||
Method | WGS_Hawaiian_Waterston |