WormBase Tree Display for Variation: WBVar00028118
expand all nodes | collapse all nodes | view schema
| WBVar00028118 | Name | Public_name | WBVar00028118 | ||
|---|---|---|---|---|---|
| Other_name | haw36746 | ||||
| haw138925 | |||||
| cewivar00191701 | |||||
| CE43705:p.Tyr208= | |||||
| F40G9.18.1:c.624T>C | |||||
| HGVSg | CHROMOSOME_III:g.167983A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | F40G9 | |
| Flanking_sequences | ttccactggtattgtgcaggaaagc | tagttaatgttttcaatatgcggta | |||
| Mapping_target | F40G9 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01388446 | |||
| WBVar00558790 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00189954 | |||
| Transcript | F40G9.18.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F40G9.18.1:c.624T>C | ||||
| HGVSp | CE43705:p.Tyr208= | ||||
| cDNA_position | 646 | ||||
| CDS_position | 624 | ||||
| Protein_position | 208 | ||||
| Exon_number | 4/6 | ||||
| Codon_change | taT/taC | ||||
| Amino_acid_change | Y | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw36746 | ||||
| Method | WGS_Hawaiian_Waterston |
