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WormBase Tree Display for Variation: WBVar00027791

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Name Class

WBVar00027791NamePublic_nameWBVar00027791
Other_namepas17155
cewivar00302470
C45E1.1a.1:c.145+501C>A
C45E1.1b.1:c.145+501C>A
C45E1.1a.2:c.145+501C>A
C45E1.1c.1:c.163+501C>A
HGVSgCHROMOSOME_I:g.3105013C>A
Sequence_detailsSMapS_parentSequenceC45E1
Flanking_sequencesattttttgtcgttatttcgttaacttaagagcactttcagacgataggtaattgatagacaaatatcggctagaaattacctaagtcgccgaaaaaacgtcacaaattacataaaatatgcaaaaaacagccaataaaatcaatttccgaccggtgtacatcggaaaatgggaaaaattgcagatttttgctaaaactaggaaaaattccgtatttttgagattttcagtcaaaaaatacctcaaaatctggcaaattgctcaaaaatgaacatttttatacagaaaaatcaggaaaaaaggtccagcaagaaccagggcggaatattcgattttcttgattttaaacaatttttttctaatttttactgcattttcgggtaatttcgaccaaattatagcaaaatccgctgaatttcgagctaaaaacaaaacaaaaagtgttggcgtgacacatgtgtgctgtgactaccatctaaacaatgcactaatgcgttatggcacatagtaaatgaagtgaactgagaatttggaggagaaagcttgtgtgagccctctccagagagaaaagggtttctctttttaatgctccaacggctct
Mapping_targetC45E1
Type_of_mutationSubstitutionCA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004604From_analysisWGS_Pasadena_Quinlan
WBStrain00006625From_analysisMillion_mutation_project_reanalysis
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00003654
TranscriptC45E1.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC45E1.1b.1:c.145+501C>A
Intron_number1/6
C45E1.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC45E1.1c.1:c.163+501C>A
Intron_number2/8
C45E1.1a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC45E1.1a.2:c.145+501C>A
Intron_number3/10
C45E1.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC45E1.1a.1:c.145+501C>A
Intron_number2/9
MethodWGS_Pasadena_Quinlan