WormBase Tree Display for Variation: WBVar00027363
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WBVar00027363 | Name | Public_name | WBVar00027363 | ||
---|---|---|---|---|---|
Other_name | haw36595 | ||||
haw138790 | |||||
cewivar00191356 | |||||
T17A3.6.1:c.324T>C | |||||
T17A3.6.2:c.324T>C | |||||
CE29343:p.Asp108= | |||||
HGVSg | CHROMOSOME_III:g.144132A>G | ||||
Sequence_details | SMap | S_parent | Sequence | T17A3 | |
Flanking_sequences | tcaatatgtctctatgaaacttaag | tcttccatgaaaatagagcaaacat | |||
Mapping_target | T17A3 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01388149 | |||
WBVar00558655 | |||||
Status | Live | ||||
Affects | Gene | WBGene00020543 | |||
WBGene00305605 | |||||
Transcript | T17A3.6.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | T17A3.6.1:c.324T>C | ||||
HGVSp | CE29343:p.Asp108= | ||||
cDNA_position | 788 | ||||
CDS_position | 324 | ||||
Protein_position | 108 | ||||
Exon_number | 4/5 | ||||
Codon_change | gaT/gaC | ||||
Amino_acid_change | D | ||||
T17A3.6.2 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | T17A3.6.2:c.324T>C | ||||
HGVSp | CE29343:p.Asp108= | ||||
cDNA_position | 621 | ||||
CDS_position | 324 | ||||
Protein_position | 108 | ||||
Exon_number | 4/5 | ||||
Codon_change | gaT/gaC | ||||
Amino_acid_change | D | ||||
T17A3.14 | |||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw36595 | ||||
Method | WGS_Hawaiian_Waterston |