WormBase Tree Display for Variation: WBVar00023481
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| WBVar00023481 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00023481 | |||
| Other_name | pas16293 | ||||
| haw3542 | |||||
| haw114741 | |||||
| cewivar00071310 | |||||
| CE30000:p.Ile65= | |||||
| Y39G10AR.22.1:c.195C>A | |||||
| HGVSg | CHROMOSOME_I:g.2328950C>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y39G10AR | |
| Flanking_sequences | aaaatgtatgtatttttagaaaaaaaaaacttcaaaaattacaaatttatgtcttttttgaaaactctactcaaacaatatacctgcctaagcctgagcctcagcctaagcctatgcctatgcctcaaccttagccttagcctaagccgaagcctaagcctaagcctaagcccctttgcatcaaaaaaccctctaactaaaaattgaattttgctgagtggccgcaaaagggaaacctcagccaccaatttttttggcggattcccaaatacttttttttccagttccccataacaagat | tactacataattcgccagatattcccgggatttgtcgttaaaaatctatcattttatctgatttggccaacaattccacttggatgtattcgtgcgacattggtatttctcataactttagatcgagttatcgccttattttttccaatttcttatcacaatcatcgcttcaaaatctcgttatcagcaataatcatctcagtttcctgttttggagcgtccgatcatctgatcctattcggttactgtaggtatacggtagatgttcctttggagtgtgacaattttaactgcgttatt | |||
| Mapping_target | Y39G10AR | ||||
| Type_of_mutation | Substitution | C | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (16) | |||||
| Laboratory | RW | ||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00150292 | |||
| WBVar00534606 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021477 | |||
| Transcript | Y39G10AR.22.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y39G10AR.22.1:c.195C>A | ||||
| HGVSp | CE30000:p.Ile65= | ||||
| cDNA_position | 195 | ||||
| CDS_position | 195 | ||||
| Protein_position | 65 | ||||
| Exon_number | 2/3 | ||||
| Codon_change | atC/atA | ||||
| Amino_acid_change | I | ||||
| Reference | WBPaper00038208 | ||||
| Method | WGS_Pasadena_Quinlan |
