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WormBase Tree Display for Variation: WBVar00019543

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Name Class

WBVar00019543NamePublic_nameWBVar00019543
Other_namehaw35031
haw137609
cewivar00145206
E01F3.1i.1:c.244+2028C>T
E01F3.1b.1:c.85+2028C>T
E01F3.1e.1:c.244+2028C>T
E01F3.1j.1:c.85+2028C>T
HGVSgCHROMOSOME_II:g.14926535C>T
Sequence_detailsSMapS_parentSequenceR03C1
Flanking_sequencesttccacctttcttttaattttccctttctttgtaatttgaaaaatgaaaa
Mapping_targetR03C1
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00022850From_analysisWGS_De_Bono
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01321363
WBVar00557474
WBVar01385748
StatusLive
AffectsGeneWBGene00008443
TranscriptE01F3.1i.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScE01F3.1i.1:c.244+2028C>T
Intron_number2/12
E01F3.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScE01F3.1e.1:c.244+2028C>T
Intron_number2/12
E01F3.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScE01F3.1b.1:c.85+2028C>T
Intron_number3/14
E01F3.1j.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScE01F3.1j.1:c.85+2028C>T
Intron_number1/11
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw35031
MethodWGS_Hawaiian_Waterston