WormBase Tree Display for Variation: WBVar00019543
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WBVar00019543 | Name | Public_name | WBVar00019543 | ||
---|---|---|---|---|---|
Other_name | haw35031 | ||||
haw137609 | |||||
cewivar00145206 | |||||
E01F3.1i.1:c.244+2028C>T | |||||
E01F3.1b.1:c.85+2028C>T | |||||
E01F3.1e.1:c.244+2028C>T | |||||
E01F3.1j.1:c.85+2028C>T | |||||
HGVSg | CHROMOSOME_II:g.14926535C>T | ||||
Sequence_details | SMap | S_parent | Sequence | R03C1 | |
Flanking_sequences | ttccacctttcttttaattttccct | ttctttgtaatttgaaaaatgaaaa | |||
Mapping_target | R03C1 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | WGS_De_Bono | |||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | WGS_De_Bono | |||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01321363 | |||
WBVar00557474 | |||||
WBVar01385748 | |||||
Status | Live | ||||
Affects | Gene | WBGene00008443 | |||
Transcript | E01F3.1i.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | E01F3.1i.1:c.244+2028C>T | ||||
Intron_number | 2/12 | ||||
E01F3.1e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | E01F3.1e.1:c.244+2028C>T | ||||
Intron_number | 2/12 | ||||
E01F3.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | E01F3.1b.1:c.85+2028C>T | ||||
Intron_number | 3/14 | ||||
E01F3.1j.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | E01F3.1j.1:c.85+2028C>T | ||||
Intron_number | 1/11 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw35031 | ||||
Method | WGS_Hawaiian_Waterston |