WormBase Tree Display for Variation: WBVar00018468
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WBVar00018468 | Name | Public_name | WBVar00018468 | ||
---|---|---|---|---|---|
Other_name | pas44394 | ||||
haw34816 | |||||
haw137451 | |||||
cewivar00101879 | |||||
W01D2.4.1:c.5T>C | |||||
CE37852:p.Phe2Ser | |||||
HGVSg | CHROMOSOME_II:g.14805990T>C | ||||
Sequence_details | SMap | S_parent | Sequence | W01D2 | |
Flanking_sequences | tcctaatctattcttgtgaagatgt | tactctgaatatgtcactattttac | |||
Mapping_target | W01D2 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (110) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson6900 | |||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Pasadena_Quinlan | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01253786 | |||
WBVar01385414 | |||||
WBVar01442564 | |||||
WBVar00557316 | |||||
WBVar00232618 | |||||
WBVar01321039 | |||||
Status | Live | ||||
Affects | Gene | WBGene00012181 | |||
Transcript | W01D2.4.1 | VEP_consequence | missense_variant | ||
VEP_impact | MODERATE | ||||
HGVSc | W01D2.4.1:c.5T>C | ||||
HGVSp | CE37852:p.Phe2Ser | ||||
cDNA_position | 5 | ||||
CDS_position | 5 | ||||
Protein_position | 2 | ||||
Exon_number | 1/5 | ||||
Codon_change | tTt/tCt | ||||
Amino_acid_change | F/S | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw34816 | ||||
Method | WGS_Hawaiian_Waterston |