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WormBase Tree Display for Variation: WBVar00018468

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Name Class

WBVar00018468NamePublic_nameWBVar00018468
Other_namepas44394
haw34816
haw137451
cewivar00101879
W01D2.4.1:c.5T>C
CE37852:p.Phe2Ser
HGVSgCHROMOSOME_II:g.14805990T>C
Sequence_detailsSMapS_parentSequenceW01D2
Flanking_sequencestcctaatctattcttgtgaagatgttactctgaatatgtcactattttac
Mapping_targetW01D2
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (110)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson6900
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
WGS_Pasadena_Quinlan
WGS_Andersen
HistoryAcquires_mergeWBVar01253786
WBVar01385414
WBVar01442564
WBVar00557316
WBVar00232618
WBVar01321039
StatusLive
AffectsGeneWBGene00012181
TranscriptW01D2.4.1VEP_consequencemissense_variant
VEP_impactMODERATE
HGVScW01D2.4.1:c.5T>C
HGVSpCE37852:p.Phe2Ser
cDNA_position5
CDS_position5
Protein_position2
Exon_number1/5
Codon_changetTt/tCt
Amino_acid_changeF/S
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw34816
MethodWGS_Hawaiian_Waterston