Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00018078

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00018078EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00018078
Other_namehaw34738
cewivar00144894
Y54E2A.2.3:c.231+389G>C
Y54E2A.2.2:c.231+389G>C
Y54E2A.2.4:c.231+389G>C
Y54E2A.2.1:c.231+389G>C
HGVSgCHROMOSOME_II:g.14751870C>G
Sequence_detailsSMapS_parentSequenceY54E2A
Flanking_sequencesaagcatttttcgtttttttcgtcgtttctgtttttttaatgtgttgaaat
Mapping_targetY54E2A
Type_of_mutationSubstitutionCG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01385289
StatusLive
AffectsGeneWBGene00013188
TranscriptY54E2A.2.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54E2A.2.2:c.231+389G>C
Intron_number2/7
Y54E2A.2.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54E2A.2.4:c.231+389G>C
Intron_number2/7
Y54E2A.2.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54E2A.2.1:c.231+389G>C
Intron_number1/5
Y54E2A.2.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54E2A.2.3:c.231+389G>C
Intron_number2/7
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw34738
MethodWGS_Hawaiian_Waterston