WormBase Tree Display for Variation: WBVar00017680
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WBVar00017680 | Name | Public_name | WBVar00017680 | ||
---|---|---|---|---|---|
Other_name | haw84634 | ||||
cewivar00244748 | |||||
H12D21.7c.2:c.408+97A>G | |||||
H12D21.7c.1:c.408+97A>G | |||||
H12D21.7b.1:c.519+97A>G | |||||
H12D21.6.1:c.465T>C | |||||
CE19919:p.Asn155= | |||||
H12D21.7b.2:c.519+97A>G | |||||
H12D21.7a.1:c.381+97A>G | |||||
HGVSg | CHROMOSOME_V:g.14897367A>G | ||||
Sequence_details | SMap | S_parent | Sequence | H12D21 | |
Flanking_sequences | atttttttccaaagtttctctgaat | ttggaatttcccatgccatttgaac | |||
Mapping_target | H12D21 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (11) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00010383 | |||
WBGene00010382 | |||||
Transcript | H12D21.7a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | H12D21.7a.1:c.381+97A>G | ||||
Intron_number | 4/7 | ||||
H12D21.7b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H12D21.7b.2:c.519+97A>G | ||||
Intron_number | 4/6 | ||||
H12D21.7b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H12D21.7b.1:c.519+97A>G | ||||
Intron_number | 5/7 | ||||
H12D21.7c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H12D21.7c.1:c.408+97A>G | ||||
Intron_number | 6/9 | ||||
H12D21.7c.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H12D21.7c.2:c.408+97A>G | ||||
Intron_number | 5/8 | ||||
H12D21.6.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | H12D21.6.1:c.465T>C | ||||
HGVSp | CE19919:p.Asn155= | ||||
cDNA_position | 465 | ||||
CDS_position | 465 | ||||
Protein_position | 155 | ||||
Exon_number | 1/1 | ||||
Codon_change | aaT/aaC | ||||
Amino_acid_change | N | ||||
Remark | [20081124 db] this Variation was previously named hw84634 | ||||
Method | WGS_Hawaiian_Waterston |