WormBase Tree Display for Variation: WBVar00017225
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| WBVar00017225 | Evidence | Paper_evidence | WBPaper00004703 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00017225 | |||
| Other_name (11) | |||||
| HGVSg | CHROMOSOME_V:g.14830367T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | W06A7 | |
| Flanking_sequences | attattaccgataattttttttttt | aatcatgaacccaatattcaaacgt | |||
| Mapping_target | W06A7 | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| History | Acquires_merge | WBVar00246642 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00004336 | |||
| Transcript | W06A7.3c.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | W06A7.3c.1:c.9311-50A>T | ||||
| Intron_number | 8/11 | ||||
| W06A7.3f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W06A7.3f.1:c.9311-50A>T | ||||
| Intron_number | 7/10 | ||||
| W06A7.3b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W06A7.3b.1:c.80-50A>T | ||||
| Intron_number | 2/5 | ||||
| W06A7.3d.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W06A7.3d.2:c.1124-50A>T | ||||
| Intron_number | 5/8 | ||||
| W06A7.3a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W06A7.3a.1:c.170-50A>T | ||||
| Intron_number | 2/5 | ||||
| W06A7.3d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W06A7.3d.1:c.1124-50A>T | ||||
| Intron_number | 4/7 | ||||
| W06A7.3g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W06A7.3g.1:c.896-50A>T | ||||
| Intron_number | 2/5 | ||||
| W06A7.3e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W06A7.3e.1:c.26-50A>T | ||||
| Intron_number | 2/4 | ||||
| Reference | WBPaper00004703 | ||||
| Remark | [20081124 db] this Variation was previously named hw84543 | ||||
| Method | WGS_Hawaiian_Waterston |
