WormBase Tree Display for Variation: WBVar00016945
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WBVar00016945 | Name | Public_name | WBVar00016945 | ||
---|---|---|---|---|---|
Other_name | haw84487 | ||||
cewivar00244551 | |||||
C47E8.8b.1:c.2409G>A | |||||
CE46864:p.Trp803Ter | |||||
CE46274:p.Trp1031Ter | |||||
C47E8.8d.1:c.3093G>A | |||||
C47E8.8a.1:c.3093G>A | |||||
C47E8.8c.1:c.2409G>A | |||||
CE47987:p.Trp1031Ter | |||||
CE46924:p.Trp803Ter | |||||
HGVSg | CHROMOSOME_V:g.14703624G>A | ||||
Sequence_details | SMap | S_parent | Sequence | C47E8 | |
Flanking_sequences | ttccagcgattaaaacagatatttg | aaattgtatcaagcaaggatgaagc | |||
Mapping_target | C47E8 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00008145 | |||
Transcript | C47E8.8d.1 | VEP_consequence | stop_gained | ||
VEP_impact | HIGH | ||||
HGVSc | C47E8.8d.1:c.3093G>A | ||||
HGVSp | CE47987:p.Trp1031Ter | ||||
cDNA_position | 3093 | ||||
CDS_position | 3093 | ||||
Protein_position | 1031 | ||||
Exon_number | 7/18 | ||||
Codon_change | tgG/tgA | ||||
Amino_acid_change | W/* | ||||
C47E8.8c.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | C47E8.8c.1:c.2409G>A | ||||
HGVSp | CE46864:p.Trp803Ter | ||||
cDNA_position | 2409 | ||||
CDS_position | 2409 | ||||
Protein_position | 803 | ||||
Exon_number | 6/17 | ||||
Codon_change | tgG/tgA | ||||
Amino_acid_change | W/* | ||||
C47E8.8b.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | C47E8.8b.1:c.2409G>A | ||||
HGVSp | CE46924:p.Trp803Ter | ||||
cDNA_position | 2409 | ||||
CDS_position | 2409 | ||||
Protein_position | 803 | ||||
Exon_number | 6/17 | ||||
Codon_change | tgG/tgA | ||||
Amino_acid_change | W/* | ||||
C47E8.8a.1 | VEP_consequence | stop_gained | |||
VEP_impact | HIGH | ||||
HGVSc | C47E8.8a.1:c.3093G>A | ||||
HGVSp | CE46274:p.Trp1031Ter | ||||
cDNA_position | 3097 | ||||
CDS_position | 3093 | ||||
Protein_position | 1031 | ||||
Exon_number | 8/20 | ||||
Codon_change | tgG/tgA | ||||
Amino_acid_change | W/* | ||||
Remark | [20081124 db] this Variation was previously named hw84487 | ||||
Method | WGS_Hawaiian_Waterston |