WormBase Tree Display for Variation: WBVar00016750
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| WBVar00016750 | Name | Public_name | WBVar00016750 | ||
|---|---|---|---|---|---|
| Other_name | pkP5085 | ||||
| haw84448 | |||||
| haw171163 | |||||
| cewivar00244503 | |||||
| C54G10.2a.2:c.2490G>A | |||||
| CE20613:p.Arg830= | |||||
| C54G10.2a.1:c.2490G>A | |||||
| HGVSg | CHROMOSOME_V:g.14642834C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C54G10 | |
| Flanking_sequences | tcttgcttcctcttcctccacgagc | cgaccaccaccacgtccacctcgag | |||
| Mapping_target | C54G10 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| History | Acquires_merge | WBVar00240710 | |||
| WBVar00591028 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00004337 | |||
| Transcript | C54G10.2a.2 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | C54G10.2a.2:c.2490G>A | ||||
| HGVSp | CE20613:p.Arg830= | ||||
| cDNA_position | 2552 | ||||
| CDS_position | 2490 | ||||
| Protein_position | 830 | ||||
| Exon_number | 9/10 | ||||
| Codon_change | cgG/cgA | ||||
| Amino_acid_change | R | ||||
| C54G10.2a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | C54G10.2a.1:c.2490G>A | ||||
| HGVSp | CE20613:p.Arg830= | ||||
| cDNA_position | 2674 | ||||
| CDS_position | 2490 | ||||
| Protein_position | 830 | ||||
| Exon_number | 10/11 | ||||
| Codon_change | cgG/cgA | ||||
| Amino_acid_change | R | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00004703 | |||||
| Remark | [20081124 db] this Variation was previously named hw84448 | ||||
| Method | WGS_Hawaiian_Waterston |
