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WormBase Tree Display for Variation: WBVar00016473

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Name Class

WBVar00016473EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00016473
Other_namehaw34417
cewivar00101456
F57C2.6a.1:c.1083+47T>A
F57C2.6b.1:c.1089+47T>A
HGVSgCHROMOSOME_II:g.14531504T>A
Sequence_detailsSMapS_parentSequenceF57C2
Flanking_sequencestcgatgggaattgctggaaaaaaatttttttttaaattggagagaaaaat
Mapping_targetF57C2
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000034From_analysisMillion_mutation_project_reanalysis
WBStrain00004599From_analysisMillion_mutation_project_reanalysis
WBStrain00004600From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WBStrain00008273From_analysisMillion_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00023665From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
WBStrain00031113From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01384839
StatusLive
AffectsGeneWBGene00010198
TranscriptF57C2.6b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF57C2.6b.1:c.1089+47T>A
Intron_number8/10
F57C2.6a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF57C2.6a.1:c.1083+47T>A
Intron_number8/10
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw34417
MethodWGS_Hawaiian_Waterston