WormBase Tree Display for Variation: WBVar00015908
expand all nodes | collapse all nodes | view schema
WBVar00015908 | Name | Public_name | WBVar00015908 | ||
---|---|---|---|---|---|
Other_name | haw34304 | ||||
haw137075 | |||||
cewivar00189242 | |||||
C13B4.1e.1:c.237+117G>A | |||||
C13B4.1b.1:c.237+117G>A | |||||
C13B4.1d.1:c.237+117G>A | |||||
C13B4.1a.1:c.237+117G>A | |||||
HGVSg | CHROMOSOME_II:g.14479273C>T | ||||
Sequence_details | SMap | S_parent | Sequence | C13B4 | |
Flanking_sequences | acaaaaattttttttttcgaaaatt | ataattcttttgttttaagctattt | |||
Mapping_target | C13B4 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00556940 | |||
WBVar01384679 | |||||
Status | Live | ||||
Affects | Gene | WBGene00007545 | |||
Transcript | C13B4.1a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C13B4.1a.1:c.237+117G>A | ||||
Intron_number | 2/13 | ||||
C13B4.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C13B4.1b.1:c.237+117G>A | ||||
Intron_number | 1/10 | ||||
C13B4.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C13B4.1d.1:c.237+117G>A | ||||
Intron_number | 1/12 | ||||
C13B4.1e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C13B4.1e.1:c.237+117G>A | ||||
Intron_number | 2/12 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw34304 | ||||
Method | WGS_Hawaiian_Waterston |