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WormBase Tree Display for Variation: WBVar00015055

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Name Class

WBVar00015055NamePublic_nameWBVar00015055
Other_namehaw84109
cewivar00244096
H39E23.1j.1:c.416+1369G>C
H39E23.1a.1:c.416+1369G>C
H39E23.1f.1:c.149+1369G>C
H39E23.1b.1:c.272+1369G>C
H39E23.1m.1:c.713+1369G>C
HGVSgCHROMOSOME_V:g.14130271C>G
Sequence_detailsSMapS_parentSequenceAH10
Flanking_sequencesatactgaaaatgacgactaagacgtaaaaagacgaagaagaagaaacaac
Mapping_targetAH10
Type_of_mutationSubstitutionCG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
WBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00003916
TranscriptH39E23.1j.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH39E23.1j.1:c.416+1369G>C
Intron_number4/16
H39E23.1f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH39E23.1f.1:c.149+1369G>C
Intron_number1/12
H39E23.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH39E23.1a.1:c.416+1369G>C
Intron_number4/16
H39E23.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH39E23.1b.1:c.272+1369G>C
Intron_number3/14
H39E23.1m.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH39E23.1m.1:c.713+1369G>C
Intron_number4/18
Remark[20081124 db] this Variation was previously named hw84109
MethodWGS_Hawaiian_Waterston