WormBase Tree Display for Variation: WBVar00015050
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| WBVar00015050 | Name | Public_name | WBVar00015050 | ||
|---|---|---|---|---|---|
| Other_name | haw84108 | ||||
| cewivar00244095 | |||||
| H39E23.1a.1:c.416+2656C>T | |||||
| H39E23.1m.1:c.713+2656C>T | |||||
| H39E23.1b.1:c.272+2656C>T | |||||
| H39E23.1j.1:c.416+2656C>T | |||||
| H39E23.1f.1:c.149+2656C>T | |||||
| HGVSg | CHROMOSOME_V:g.14128984G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | AH10 | |
| Flanking_sequences | ggttccgggttttcagccgtttggg | actgaagaaacgccagaaatgttcc | |||
| Mapping_target | AH10 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00003916 | |||
| Transcript | H39E23.1j.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | H39E23.1j.1:c.416+2656C>T | ||||
| Intron_number | 4/16 | ||||
| H39E23.1f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | H39E23.1f.1:c.149+2656C>T | ||||
| Intron_number | 1/12 | ||||
| H39E23.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | H39E23.1a.1:c.416+2656C>T | ||||
| Intron_number | 4/16 | ||||
| H39E23.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | H39E23.1b.1:c.272+2656C>T | ||||
| Intron_number | 3/14 | ||||
| H39E23.1m.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | H39E23.1m.1:c.713+2656C>T | ||||
| Intron_number | 4/18 | ||||
| Remark | [20081124 db] this Variation was previously named hw84108 | ||||
| Method | WGS_Hawaiian_Waterston |
