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WormBase Tree Display for Variation: WBVar00014781

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Name Class

WBVar00014781NamePublic_nameWBVar00014781
Other_namepas14553
snp_Y48G8AR[5]
haw1820
haw113512
cewivar00068195
Y48G8AR.1b.1:c.738+18G>A
Y48G8AR.1a.1:c.738+18G>A
HGVSgCHROMOSOME_I:g.1266252C>T
Sequence_detailsSMapS_parentSequenceY48G8AR
Flanking_sequencestatggaagtggaagagttttcctaaagttcggccctaacataagctcgatcccaaagcctagaaaaattttaaaaattttatttaggttcaaaattttaggagctctaaagaaaattcaataattcttgttactgtagtaatttggaacaaattttcaacaacttagcaaaaaaaaccaagtttccaaatatatgggttcacgggttccccttaccccgcgtggccgaactttccggaaaactcttccaccgtcataactcgctccccatccctcctagagaccccaaacattatcaaaattcaaaaaattgctcaccttaaccgtctgactcttcaaacatttgttcagatccggtgtatactctaatgaaactgtgtagaattgtcctttattcacatatgtcatccgatcatcatctcgtcgtactgacgtggatattggagcctcgagcacatattggaaaccgagattgttatatctgcagaattttcgaaaattttagagaaagtttgaaaaaaatttattttaaaaaatgctaaaattttttttctctaaaaattcaaaagttgtttaagcctaccagagcataaagttacat
Mapping_targetY48G8AR
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (34)
LaboratoryAX
RW
PersonWBPerson6900
WBPerson4037
WBPerson1562
AnalysisWGS_Pasadena_Quinlan
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
SNP_Wicks
WGS_Hawaiian_Waterston
HistoryAcquires_mergeWBVar01277493
WBVar00148570
WBVar01417811
WBVar01303606
WBVar00533377
WBVar00247426
StatusLive
AffectsGeneWBGene00001707
TranscriptY48G8AR.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G8AR.1a.1:c.738+18G>A
Intron_number3/9
Y48G8AR.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G8AR.1b.1:c.738+18G>A
Intron_number2/8
ReferenceWBPaper00038208
WBPaper00004703
WBPaper00037807
MethodWGS_Pasadena_Quinlan