WormBase Tree Display for Variation: WBVar00012821
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| WBVar00012821 | Name | Public_name | WBVar00012821 | ||
|---|---|---|---|---|---|
| Other_name | pas14161 | ||||
| uCE2-550 | |||||
| haw17040 | |||||
| haw124360 | |||||
| cewivar00077684 | |||||
| T07D3.7b.1:c.1679-70T>C | |||||
| T07D3.7a.1:c.1736-70T>C | |||||
| HGVSg | CHROMOSOME_II:g.876958T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | T07D3 | |
| Flanking_sequences | ccaatcatcggtacccctatgttctgcaaatatgcttctggagtggagcaggtggagccgatgttcaagtacttgaagcagacctattcggcgattcagttgattgtggtggtgctgccaggaaagactccgatctatggtaagttgattaattgtaggtgaaagttctagggtgttggtgtaagctttacgctcctaggttccaaggatctagatcttagatcatggagtcctgggatcctaagctgctaggctcttggaatcctaggttccaaggatctatggcctagatcattgggc | ctgaatcttgggaccaagatcatctatatccttacctcttcaaccccatctgaagctctatattttcagccgaagtgaaacgcgtcggagacaccgtcctcggaatcgccacccagtgcgtccaggccaagaacgccatccgaaccaccccgcagacactctccaacctctgtctcaagatgaatgtgaagcttggtggagtcaacagcatcctcctgccaaacgtgcgtccacggatcttcaacgagcccgtcatcttcctgggttgcgacatcacccatccagcagccggtgataccc | |||
| Mapping_target | T07D3 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (11) | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Swan | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00544225 | |||
| WBVar01358949 | |||||
| WBVar00163790 | |||||
| WBVar01293027 | |||||
| WBVar00267742 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00000106 | |||
| Transcript | T07D3.7b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | T07D3.7b.1:c.1679-70T>C | ||||
| Intron_number | 5/7 | ||||
| T07D3.7a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T07D3.7a.1:c.1736-70T>C | ||||
| Intron_number | 5/7 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| WBPaper00005369 | |||||
| Method | WGS_Pasadena_Quinlan |
