WormBase Tree Display for Variation: WBVar00012370
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WBVar00012370 | Name | Public_name | WBVar00012370 | ||
---|---|---|---|---|---|
Other_name | haw83572 | ||||
cewivar00243443 | |||||
C50B6.8b.1:c.872+3G>A | |||||
C50B6.8a.1:c.980+3G>A | |||||
C50B6.8a.2:c.980+3G>A | |||||
HGVSg | CHROMOSOME_V:g.13332001C>T | ||||
Sequence_details | SMap | S_parent | Sequence | C50B6 | |
Flanking_sequences | tttgcaaatattttctttgcaaact | acttcttcattggtgccagtttccc | |||
Mapping_target | C50B6 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00008221 | |||
Transcript | C50B6.8a.2 | VEP_consequence | splice_region_variant,intron_variant | ||
VEP_impact | LOW | ||||
HGVSc | C50B6.8a.2:c.980+3G>A | ||||
Intron_number | 4/6 | ||||
C50B6.8a.1 | VEP_consequence | splice_region_variant,intron_variant | |||
VEP_impact | LOW | ||||
HGVSc | C50B6.8a.1:c.980+3G>A | ||||
Intron_number | 5/7 | ||||
C50B6.8b.1 | VEP_consequence | splice_region_variant,intron_variant | |||
VEP_impact | LOW | ||||
HGVSc | C50B6.8b.1:c.872+3G>A | ||||
Intron_number | 3/4 | ||||
Remark | [20081124 db] this Variation was previously named hw83572 | ||||
Method | WGS_Hawaiian_Waterston |