WormBase Tree Display for Variation: WBVar00012079

WBVar00012079 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00012079
    Other_name: cbs10558
      cb10558 Paper_evidence: WBPaper00055507
    HGVSg
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc0129
    Flanking_sequences: gaacatggttgtgagtgagtttttt aaaaaaagacgttttcatgctttat
    Mapping_target: cb25.fpc0129
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest (16)
      Polymorphic_strain_digest (16)
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00027983
    Transcript: CBG05555a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        Intron_number: 24/34
      CBG05555b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        Intron_number: 23/32
      CBG05555c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        Intron_number: 23/32
      CBG05555d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        Intron_number: 21/30
      CBG05555f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        Intron_number: 23/30
      CBG05555f.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        Intron_number: 23/30
      CBG05555f.3 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        cDNA_position: 6074
        Exon_number: 23/23
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: CrossMatch, Polybayes, ssaha-SNP v1.0, ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP