WormBase Tree Display for Variation: WBVar00011553
expand all nodes | collapse all nodes | view schema
WBVar00011553 | Name | Public_name | WBVar00011553 | ||
---|---|---|---|---|---|
Other_name | haw33433 | ||||
haw136395 | |||||
cewivar00188788 | |||||
W02B8.2.1:c.*80C>T | |||||
HGVSg | CHROMOSOME_II:g.13915199C>T | ||||
Sequence_details | SMap | S_parent | Sequence | W02B8 | |
Flanking_sequences | tccagtcatcattgtttattttaat | tccaaaatgtctgatctctgagttg | |||
Mapping_target | W02B8 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00556260 | |||
WBVar01383301 | |||||
Status | Live | ||||
Affects | Gene | WBGene00012198 | |||
Transcript | W02B8.2.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W02B8.2.1:c.*80C>T | ||||
cDNA_position | 3862 | ||||
Exon_number | 8/8 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw33433 | ||||
Method | WGS_Hawaiian_Waterston |