WormBase Tree Display for Variation: WBVar00010990
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| WBVar00010990 | Name | Public_name | WBVar00010990 | ||
|---|---|---|---|---|---|
| Other_name | haw83296 | ||||
| cewivar00243132 | |||||
| F18E2.4.1:c.732C>T | |||||
| F18E2.10:n.10G>A | |||||
| CE40846:p.Phe244= | |||||
| HGVSg | CHROMOSOME_V:g.12770295C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F18E2 | |
| Flanking_sequences | aatcaaaagcatcacgtcaagtatt | atccaatcaagcattatttgttctt | |||
| Mapping_target | F18E2 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00197009 | |||
| WBGene00008937 | |||||
| Transcript | F18E2.10 | VEP_consequence | non_coding_transcript_exon_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F18E2.10:n.10G>A | ||||
| cDNA_position | 10 | ||||
| Exon_number | 1/1 | ||||
| F18E2.4.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | F18E2.4.1:c.732C>T | ||||
| HGVSp | CE40846:p.Phe244= | ||||
| cDNA_position | 754 | ||||
| CDS_position | 732 | ||||
| Protein_position | 244 | ||||
| Exon_number | 5/7 | ||||
| Codon_change | ttC/ttT | ||||
| Amino_acid_change | F | ||||
| Remark | [20081124 db] this Variation was previously named hw83296 | ||||
| Method | WGS_Hawaiian_Waterston |
