WormBase Tree Display for Variation: WBVar00008735
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| WBVar00008735 | Evidence | Paper_evidence | WBPaper00040707 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00008735 | |||
| Other_name | haw82845 | ||||
| cewivar00242596 | |||||
| CE05505:p.Leu54= | |||||
| C54D10.9.1:c.162T>G | |||||
| HGVSg | CHROMOSOME_V:g.12447709T>G | ||||
| Sequence_details | SMap | S_parent | Sequence | C54D10 | |
| Flanking_sequences | aaatgcaaatgattcgaagaattct | gaagatatttatggaggaacatggg | |||
| Mapping_target | C54D10 | ||||
| Type_of_mutation | Substitution | T | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WGS_Andersen | |||||
| WBStrain00023084 | From_analysis | WGS_Andersen | |||
| WBStrain00023139 | From_analysis | WGS_Andersen | |||
| WBStrain00023279 | From_analysis | WGS_Andersen | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WGS_Andersen | |||||
| WBStrain00027660 | From_analysis | WGS_Andersen | |||
| WBStrain00027661 | From_analysis | WGS_Andersen | |||
| WBStrain00027662 | From_analysis | WGS_Andersen | |||
| WBStrain00027669 | From_analysis | WGS_Andersen | |||
| Laboratory | RW | ||||
| QX | |||||
| Person | WBPerson1562 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01462136 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00008303 | |||
| Transcript | C54D10.9.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | C54D10.9.1:c.162T>G | ||||
| HGVSp | CE05505:p.Leu54= | ||||
| cDNA_position | 508 | ||||
| CDS_position | 162 | ||||
| Protein_position | 54 | ||||
| Exon_number | 3/7 | ||||
| Codon_change | ctT/ctG | ||||
| Amino_acid_change | L | ||||
| Reference | WBPaper00040707 | ||||
| Remark | [20081124 db] this Variation was previously named hw82845 | ||||
| Method | WGS_Hawaiian_Waterston |
