WormBase Tree Display for Variation: WBVar00008495
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WBVar00008495 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00008495 | |||
Other_name | haw82797 | ||||
haw170133 | |||||
cewivar00242544 | |||||
C54D10.8b.1:c.891T>C | |||||
CE45432:p.Asn334= | |||||
C54D10.8a.1:c.1002T>C | |||||
CE47766:p.Asn297= | |||||
HGVSg | CHROMOSOME_V:g.12445569A>G | ||||
Sequence_details | SMap | S_parent | Sequence | C54D10 | |
Flanking_sequences | gcaacttctccatttcgtatttttc | ttgtccataatacttttctgattaa | |||
Mapping_target | C54D10 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00589998 | |||
Status | Live | ||||
Affects | Gene | WBGene00008302 | |||
Transcript | C54D10.8a.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | C54D10.8a.1:c.1002T>C | ||||
HGVSp | CE45432:p.Asn334= | ||||
cDNA_position | 1041 | ||||
CDS_position | 1002 | ||||
Protein_position | 334 | ||||
Exon_number | 6/8 | ||||
Codon_change | aaT/aaC | ||||
Amino_acid_change | N | ||||
C54D10.8b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | C54D10.8b.1:c.891T>C | ||||
HGVSp | CE47766:p.Asn297= | ||||
cDNA_position | 891 | ||||
CDS_position | 891 | ||||
Protein_position | 297 | ||||
Exon_number | 5/6 | ||||
Codon_change | aaT/aaC | ||||
Amino_acid_change | N | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw82797 | ||||
Method | WGS_Hawaiian_Waterston |