WormBase Tree Display for Variation: WBVar00005975
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| WBVar00005975 | Name | Public_name | WBVar00005975 | ||
|---|---|---|---|---|---|
| Other_name | haw82293 | ||||
| haw169833 | |||||
| cewivar00241923 | |||||
| CE27774:p.Ile272= | |||||
| R31.3.1:c.816T>C | |||||
| HGVSg | CHROMOSOME_V:g.11925787A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | R31 | |
| Flanking_sequences | aaaccttgatctgctgggacatatg | atatgatctggaatatttgtgtaat | |||
| Mapping_target | R31 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| WBStrain00005299 | From_analysis | WGS_Andersen | |||
| WBStrain00005300 | From_analysis | WGS_Andersen | |||
| WBStrain00005307 | From_analysis | WGS_Andersen | |||
| WBStrain00005310 | From_analysis | WGS_Andersen | |||
| WBStrain00005835 | From_analysis | WGS_Andersen | |||
| WBStrain00023279 | From_analysis | WGS_Andersen | |||
| WBStrain00030851 | From_analysis | WGS_Andersen | |||
| Laboratory | RW | ||||
| QX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| WBPerson1730 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar00589698 | |||
| WBVar01461922 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00003886 | |||
| Transcript | R31.3.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | R31.3.1:c.816T>C | ||||
| HGVSp | CE27774:p.Ile272= | ||||
| cDNA_position | 856 | ||||
| CDS_position | 816 | ||||
| Protein_position | 272 | ||||
| Exon_number | 9/13 | ||||
| Codon_change | atT/atC | ||||
| Amino_acid_change | I | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00040707 | |||||
| Remark | [20081124 db] this Variation was previously named hw82293 | ||||
| Method | WGS_Hawaiian_Waterston |
