WormBase Tree Display for Variation: WBVar00005861
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| WBVar00005861 | Name | Public_name | WBVar00005861 | ||
|---|---|---|---|---|---|
| Other_name | pas12769 | ||||
| cewivar00017577 | |||||
| C09F5.1a.1:c.1263+99C>T | |||||
| C09F5.1b.1:c.684+99C>T | |||||
| HGVSg | CHROMOSOME_III:g.661479C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C09F5 | |
| Flanking_sequences | acttcctcttgaaccagaatcaaagttatcaaattttgatttgaaaaaccctccattctttcagggctatgttgcttacgccgatcattccctaaccgatgcaaatggaaaacatttcacgtgcttcttgatgcctttggacagaagtgcaattgatagcattgatcaactctctgaagctgtatccgagtcaagttatgaagttagttttaagactgaaccaaccttcaatgaattatcagaaaacttggaactacccaaaaaatttaaggatccaacaaaattgaactcagaatctgt | agaaattaatttaaacctaccaggaaatagacggatctatcagttgactccaggacctattaaaaaattttgggacatgccagaaaattctaggacctaccggaaaattttagaacttgccggaaaattttaagacctatcagaaaattctgggacatgtcaaaaaattttagggcctaccctgaaattctagaacttgcctgaaagtttttgatgacttatcaaaaatctctaggcagttctaagaaaaaaatctcctaacctgcattttaacagatccaatctactttcggctggcaa | |||
| Mapping_target | C09F5 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (17) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00015647 | |||
| Transcript | C09F5.1a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C09F5.1a.1:c.1263+99C>T | ||||
| Intron_number | 7/10 | ||||
| C09F5.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C09F5.1b.1:c.684+99C>T | ||||
| Intron_number | 5/8 | ||||
| Method | WGS_Pasadena_Quinlan |
