WormBase Tree Display for Variation: WBVar00005650

WBVar00005650 Name: Public_name: WBVar00005650
    Other_name: snp_D2023[7]
      haw82228
      haw169795
      cewivar00241850
      D2023.3a.1:c.142-847A>G
    HGVSg: CHROMOSOME_V:g.11806498T>C
  Sequence_details: SMap: S_parent: Sequence: D2023
    Flanking_sequences: aaaaaagcgaacgactcgtttcctt gagatggcggtcgacgcgggaattt
    Mapping_target: D2023
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: SNP_Wicks
          WGS_Hawaiian_Waterston
          WGS_Yanai
          Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00005835 From_analysis: WGS_Andersen
      WBStrain00023072 From_analysis: Million_mutation_project_reanalysis
          WGS_Andersen
      WBStrain00023084 From_analysis: WGS_Andersen
      WBStrain00023279 From_analysis: WGS_Andersen
      WBStrain00031279 From_analysis: WGS_Andersen
      WBStrain00031284 From_analysis: WGS_Andersen
    Laboratory: RW
      QX
    Person: WBPerson1562
      WBPerson4037
      WBPerson1730
    Analysis: WGS_Hawaiian_Waterston
      WGS_Yanai
      Million_mutation_project_reanalysis
      SNP_Wicks
      WGS_Andersen
    History: Acquires_merge: WBVar01461887
        WBVar00243936
        WBVar00589660
    Status: Live
  Affects: Gene: WBGene00008407
    Transcript: D2023.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: D2023.3a.1:c.142-847A>G
        Intron_number: 3/7
  Reference: WBPaper00038208
    WBPaper00040707
    WBPaper00004703
  Remark: [20081124 db] this Variation was previously named hw82228
  Method: WGS_Hawaiian_Waterston