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WormBase Tree Display for Variation: WBVar00005413

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Name Class

WBVar00005413EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00005413
Other_namepas42868
haw32205
cewivar00097963
Y48C3A.5a.1:c.141+2023A>C
Y48C3A.5d.1:c.7-3378A>C
Y48C3A.5b.1:c.141+2023A>C
HGVSgCHROMOSOME_II:g.13274797A>C
Sequence_detailsSMapS_parentSequenceY48C3A
Flanking_sequencesattttctccctaaaaagttaaactcgccccttttgtgggcgtggctttca
Mapping_targetY48C3A
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (33)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson6900
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
WGS_Pasadena_Quinlan
HistoryAcquires_mergeWBVar01316320
WBVar00231092
WBVar01381342
WBVar01249746
StatusLive
AffectsGeneWBGene00012989
TranscriptY48C3A.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48C3A.5d.1:c.7-3378A>C
Intron_number1/9
Y48C3A.5b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48C3A.5b.1:c.141+2023A>C
Intron_number1/11
Y48C3A.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48C3A.5a.1:c.141+2023A>C
Intron_number1/10
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw32205
MethodWGS_Hawaiian_Waterston