WormBase Tree Display for Variation: WBVar00003550
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WBVar00003550 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00003550 | |||
Other_name | haw81808 | ||||
haw169527 | |||||
cewivar00241369 | |||||
T04C12.2a.1:c.717C>T | |||||
CE48106:p.Tyr203= | |||||
T04C12.2b.1:c.609C>T | |||||
CE48189:p.Tyr239= | |||||
HGVSg | CHROMOSOME_V:g.11056085G>A | ||||
Sequence_details | SMap | S_parent | Sequence | T04C12 | |
Flanking_sequences | aagaaatcattattgctgtagagat | tataaataatatatgcaacatattg | |||
Mapping_target | T04C12 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00589392 | |||
Status | Live | ||||
Affects | Gene | WBGene00005296 | |||
Transcript | T04C12.2b.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | T04C12.2b.1:c.609C>T | ||||
HGVSp | CE48106:p.Tyr203= | ||||
cDNA_position | 609 | ||||
CDS_position | 609 | ||||
Protein_position | 203 | ||||
Exon_number | 4/5 | ||||
Codon_change | taC/taT | ||||
Amino_acid_change | Y | ||||
T04C12.2a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | T04C12.2a.1:c.717C>T | ||||
HGVSp | CE48189:p.Tyr239= | ||||
cDNA_position | 717 | ||||
CDS_position | 717 | ||||
Protein_position | 239 | ||||
Exon_number | 4/6 | ||||
Codon_change | taC/taT | ||||
Amino_acid_change | Y | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw81808 | ||||
Method | WGS_Hawaiian_Waterston |