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WormBase Tree Display for Variation: WBVar00003550

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Name Class

WBVar00003550EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00003550
Other_namehaw81808
haw169527
cewivar00241369
T04C12.2a.1:c.717C>T
CE48106:p.Tyr203=
T04C12.2b.1:c.609C>T
CE48189:p.Tyr239=
HGVSgCHROMOSOME_V:g.11056085G>A
Sequence_detailsSMapS_parentSequenceT04C12
Flanking_sequencesaagaaatcattattgctgtagagattataaataatatatgcaacatattg
Mapping_targetT04C12
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00589392
StatusLive
AffectsGeneWBGene00005296
TranscriptT04C12.2b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScT04C12.2b.1:c.609C>T
HGVSpCE48106:p.Tyr203=
cDNA_position609
CDS_position609
Protein_position203
Exon_number4/5
Codon_changetaC/taT
Amino_acid_changeY
T04C12.2a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScT04C12.2a.1:c.717C>T
HGVSpCE48189:p.Tyr239=
cDNA_position717
CDS_position717
Protein_position239
Exon_number4/6
Codon_changetaC/taT
Amino_acid_changeY
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw81808
MethodWGS_Hawaiian_Waterston