WormBase Tree Display for Variation: WBVar00003425
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WBVar00003425 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00003425 | |||
Other_name | haw81783 | ||||
haw169515 | |||||
cewivar00241341 | |||||
C13G3.3d.1:c.46+462G>T | |||||
C13G3.3a.4:c.-6+462G>T | |||||
C13G3.3a.2:c.-5-614G>T | |||||
C13G3.3b.2:c.-5-614G>T | |||||
C13G3.3c.1:c.146-614G>T | |||||
C13G3.3b.3:c.-6+462G>T | |||||
C13G3.3a.3:c.-5-614G>T | |||||
HGVSg | CHROMOSOME_V:g.11030001C>A | ||||
Sequence_details | SMap | S_parent | Sequence | C13G3 | |
Flanking_sequences | atcaatagtgtgccttgagggctca | agatttcttgttgttggttggatgg | |||
Mapping_target | C13G3 | ||||
Type_of_mutation | Substitution | C | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00589380 | |||
Status | Live | ||||
Affects | Gene | WBGene00007554 | |||
Transcript | C13G3.3c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C13G3.3c.1:c.146-614G>T | ||||
Intron_number | 1/5 | ||||
C13G3.3a.4 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C13G3.3a.4:c.-6+462G>T | ||||
Intron_number | 1/7 | ||||
C13G3.3b.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C13G3.3b.3:c.-6+462G>T | ||||
Intron_number | 1/7 | ||||
C13G3.3a.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C13G3.3a.3:c.-5-614G>T | ||||
Intron_number | 2/8 | ||||
C13G3.3d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C13G3.3d.1:c.46+462G>T | ||||
Intron_number | 1/5 | ||||
C13G3.3a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C13G3.3a.2:c.-5-614G>T | ||||
Intron_number | 1/7 | ||||
C13G3.3b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C13G3.3b.2:c.-5-614G>T | ||||
Intron_number | 1/7 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw81783 | ||||
Method | WGS_Hawaiian_Waterston |