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WormBase Tree Display for Variation: WBVar00003425

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Name Class

WBVar00003425EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00003425
Other_namehaw81783
haw169515
cewivar00241341
C13G3.3d.1:c.46+462G>T
C13G3.3a.4:c.-6+462G>T
C13G3.3a.2:c.-5-614G>T
C13G3.3b.2:c.-5-614G>T
C13G3.3c.1:c.146-614G>T
C13G3.3b.3:c.-6+462G>T
C13G3.3a.3:c.-5-614G>T
HGVSgCHROMOSOME_V:g.11030001C>A
Sequence_detailsSMapS_parentSequenceC13G3
Flanking_sequencesatcaatagtgtgccttgagggctcaagatttcttgttgttggttggatgg
Mapping_targetC13G3
Type_of_mutationSubstitutionCA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00589380
StatusLive
AffectsGeneWBGene00007554
TranscriptC13G3.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC13G3.3c.1:c.146-614G>T
Intron_number1/5
C13G3.3a.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC13G3.3a.4:c.-6+462G>T
Intron_number1/7
C13G3.3b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC13G3.3b.3:c.-6+462G>T
Intron_number1/7
C13G3.3a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC13G3.3a.3:c.-5-614G>T
Intron_number2/8
C13G3.3d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC13G3.3d.1:c.46+462G>T
Intron_number1/5
C13G3.3a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC13G3.3a.2:c.-5-614G>T
Intron_number1/7
C13G3.3b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC13G3.3b.2:c.-5-614G>T
Intron_number1/7
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw81783
MethodWGS_Hawaiian_Waterston