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WormBase Tree Display for Variation: WBVar00002625

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Name Class

WBVar00002625EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00002625
Other_namehaw81623
haw169413
cewivar00241139
C29A12.4b.1:c.3823+564A>G
C29A12.4a.1:c.3823+564A>G
C29A12.4l.1:c.3850+564A>G
C29A12.4k.1:c.3850+564A>G
HGVSgCHROMOSOME_V:g.10832912A>G
Sequence_detailsSMapS_parentSequenceC29A12
Flanking_sequencesgaaatgcccagtcaaaatacatatattagaggcgtcgtatatgaaatgtg
Mapping_targetC29A12
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00023072From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00589278
StatusLive
AffectsGeneWBGene00007799
TranscriptC29A12.4l.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC29A12.4l.1:c.3850+564A>G
Intron_number21/27
C29A12.4k.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC29A12.4k.1:c.3850+564A>G
Intron_number21/28
C29A12.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC29A12.4a.1:c.3823+564A>G
Intron_number21/28
C29A12.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC29A12.4b.1:c.3823+564A>G
Intron_number21/29
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw81623
MethodWGS_Hawaiian_Waterston