WormBase Tree Display for Variation: WBVar00002595
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| WBVar00002595 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00002595 | |||
| Other_name (11) | |||||
| HGVSg | CHROMOSOME_V:g.10825200A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | C29A12 | |
| Flanking_sequences | ttcatagaccattttttaggtatcc | aaatgggcgcactcattcgaaaatt | |||
| Mapping_target | C29A12 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00589277 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00007799 | |||
| Transcript | C29A12.4l.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | C29A12.4l.1:c.126A>G | ||||
| HGVSp | CE47540:p.Pro42= | ||||
| cDNA_position | 126 | ||||
| CDS_position | 126 | ||||
| Protein_position | 42 | ||||
| Exon_number | 2/28 | ||||
| Codon_change | ccA/ccG | ||||
| Amino_acid_change | P | ||||
| C29A12.4k.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | C29A12.4k.1:c.126A>G | ||||
| HGVSp | CE47593:p.Pro42= | ||||
| cDNA_position | 126 | ||||
| CDS_position | 126 | ||||
| Protein_position | 42 | ||||
| Exon_number | 2/29 | ||||
| Codon_change | ccA/ccG | ||||
| Amino_acid_change | P | ||||
| C29A12.4a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | C29A12.4a.1:c.126A>G | ||||
| HGVSp | CE46835:p.Pro42= | ||||
| cDNA_position | 139 | ||||
| CDS_position | 126 | ||||
| Protein_position | 42 | ||||
| Exon_number | 3/29 | ||||
| Codon_change | ccA/ccG | ||||
| Amino_acid_change | P | ||||
| C29A12.4b.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | C29A12.4b.1:c.126A>G | ||||
| HGVSp | CE46888:p.Pro42= | ||||
| cDNA_position | 136 | ||||
| CDS_position | 126 | ||||
| Protein_position | 42 | ||||
| Exon_number | 3/30 | ||||
| Codon_change | ccA/ccG | ||||
| Amino_acid_change | P | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw81617 | ||||
| Method | WGS_Hawaiian_Waterston |
