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WormBase Tree Display for Variation: WBVar00001978

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Name Class

WBVar00001978EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00001978
Other_namehaw31518
cewivar00015684
Y46G5A.1c.1:c.1475-130T>C
Y46G5A.1a.1:c.2363-130T>C
Y46G5A.1b.1:c.2363-130T>C
HGVSgCHROMOSOME_II:g.12718639T>C
Sequence_detailsSMapS_parentSequenceY46G5A
Flanking_sequencestaaaattcagtaatttttttaatgttaaaatgaatttacctactgaaaat
Mapping_targetY46G5A
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (36)
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01380183
WBVar01248730
WBVar01315213
StatusLive
AffectsGeneWBGene00012894
TranscriptY46G5A.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46G5A.1b.1:c.2363-130T>C
Intron_number10/16
Y46G5A.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46G5A.1a.1:c.2363-130T>C
Intron_number11/17
Y46G5A.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46G5A.1c.1:c.1475-130T>C
Intron_number5/11
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw31518
MethodWGS_Hawaiian_Waterston