WormBase Tree Display for Variation: WBVar00001064

WBVar00001064 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00001064
    Other_name: cbs686
      cb686 Paper_evidence: WBPaper00055507
    HGVSg: chrI:g.14742672G>A
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc4140
    Flanking_sequences: agcaactcacccatcaactcgagga gccgaggagcgtgccgatcaagccg
    Mapping_target: cb25.fpc4140
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest (11)
      Polymorphic_strain_digest (11)
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00038900
    Transcript: CBG19730.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: CBG19730.1:c.5742C>T
        HGVSp: CBP04616.1:p.Asp1914%3D
        cDNA_position: 5869
        CDS_position: 5742
        Protein_position: 1914
        Exon_number: 10/11
        Codon_change: gaC/gaT
        Amino_acid_change: D
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: CrossMatch, Polybayes, ssaha-SNP v1.0, ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP