WormBase Tree Display for Variation: WBVar00000599
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| WBVar00000599 | Evidence | Paper_evidence | WBPaper00004312 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | bx107 | |||||
| Other_name | F47A4.2.1:c.9595C>T | ||||||
| CE16058:p.Gln3199Ter | |||||||
| HGVSg | CHROMOSOME_X:g.9811545G>A | ||||||
| Sequence_details | SMap | S_parent | Sequence | F47A4 | |||
| Flanking_sequences | ggacaacaacaagggtatgatcagcagcag | agggacagatcgctcctcagcaagctcaaa | |||||
| Mapping_target | F47A4 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00004312 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00007184 | ||||||
| Laboratory | EM | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00001081 | |||||
| Transcript | F47A4.2.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | F47A4.2.1:c.9595C>T | ||||||
| HGVSp | CE16058:p.Gln3199Ter | ||||||
| cDNA_position | 9698 | ||||||
| CDS_position | 9595 | ||||||
| Protein_position | 3199 | ||||||
| Exon_number | 18/21 | ||||||
| Codon_change | Cag/Tag | ||||||
| Amino_acid_change | Q/* | ||||||
| Interactor | WBInteraction000524367 | ||||||
| Genetics | Interpolated_map_position | X | 1.66105 | ||||
| Reference | WBPaper00004312 | ||||||
| Method | Substitution_allele |
