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WormBase Tree Display for Transgene: WBTransgene00005065

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Name Class

WBTransgene00005065Public_namewIs51
Summary[SCMp::GFP + unc-119(+)]
Synonym[SCM::gfp + unc-119(+)]
ConstructionConstructWBCnstr00005042
CoinjectionWBCnstr00001971
Construction_summarySCM reporter remark: The identity of the "SCM" promoter sequence was a mystery for a long time. A 2011 PhD thesis from Charles Brabin of Alison Woollard's lab appears to have identified the sequence as a ~7.8kb region of chromosome IV spanning the genes arf-5 ("arf-3" in the thesis), mec-17, and col-115. The sequence responsible for driving the seam cell-specific expression appears to be the 3' end of the arf-5 gene. Information regarding the sequence can be found in Chapter 5 of the thesis with the region and sequence depicted in Figure 5.1 on page 124. The thesis can be found here: https:
Genetic_informationIntegrated
PhenotypeWBPhenotype:0000138Paper_evidenceWBPaper00035868
Curator_confirmedWBPerson426
WBPhenotype:0000948Paper_evidenceWBPaper00035868
Curator_confirmedWBPerson426
WBPhenotype:0001211Paper_evidenceWBPaper00035868
Curator_confirmedWBPerson426
Used_forExpr_patternMarker24
Marker_forSeam cell nuclei.Paper_evidenceWBPaper00030774
WBPaper00035157
Associated_withStrain (12)
ReferenceWBPaper00005131
WBPaper00005912
WBPaper00006366
WBPaper00024453
WBPaper00024664
WBPaper00024891
WBPaper00027135
WBPaper00028428
WBPaper00029198
WBPaper00030767
WBPaper00030774
WBPaper00030927
WBPaper00030954
WBPaper00031094
WBPaper00031488
WBPaper00031557
WBPaper00031898
WBPaper00032309
WBPaper00033104
WBPaper00033452
WBPaper00033465
WBPaper00034732
WBPaper00034768
WBPaper00035069
WBPaper00035152
WBPaper00035157
WBPaper00035180
WBPaper00035325
WBPaper00035573
WBPaper00035868
WBPaper00036007
WBPaper00036079
WBPaper00036466
WBPaper00036713
WBPaper00036723
WBPaper00036739
WBPaper00037609
WBPaper00037616
WBPaper00037796
WBPaper00037838
WBPaper00038069
WBPaper00038300
WBPaper00038364
WBPaper00040066
WBPaper00040221
WBPaper00040225
WBPaper00040261
WBPaper00040276
WBPaper00040326
WBPaper00040343
WBPaper00040537
WBPaper00040643
WBPaper00040942
WBPaper00040962
WBPaper00041094
WBPaper00041123
WBPaper00041636
WBPaper00042315
WBPaper00042320
WBPaper00042342
WBPaper00043932
WBPaper00045017
WBPaper00045179
WBPaper00045204
WBPaper00045459
WBPaper00046050
WBPaper00046112
WBPaper00046295
WBPaper00046304
WBPaper00046677
WBPaper00046887
WBPaper00046889
WBPaper00048715
WBPaper00048898
WBPaper00048940
WBPaper00049139
WBPaper00049286
WBPaper00049356
WBPaper00049804
WBPaper00050041
WBPaper00050214
WBPaper00050521
WBPaper00051358
WBPaper00051366
WBPaper00053295
WBPaper00053555
WBPaper00053602
WBPaper00054726
WBPaper00055958
WBPaper00055984
WBPaper00056056
WBPaper00056761
WBPaper00057033
WBPaper00058684
WBPaper00058801
WBPaper00059001
WBPaper00059061
WBPaper00059223
WBPaper00059516
WBPaper00059808
SpeciesCaenorhabditis elegans