WormBase Tree Display for RNAi: WBRNAi00098402
expand all nodes | collapse all nodes | view schema
| WBRNAi00098402 | Homol | Homol_homol | Y55D5A:RNAi | ||
|---|---|---|---|---|---|
| Sequence_info | DNA_text | TGTCTCAGTAACGGCGACCTCTGTACACGGCGCTGGACCGGAAGCCGAATCCTCCGACCCAATCGTCGTCATGACGCCAGGCTTCTTCACTGTGGAAATCATTCTCGGCATGCTTCTCGTCTTTTTGATTTTAATGTCAATTGCCGGTTGTATAATCTACTACTACATTCAAGTACGCTACGGCAAAAAAGTGAAAGCTCTATCTGACTTTATGCAATTGAATCCCGAATATTGTGTGGACAATAAGTACAATGCAGACGATTGGGAGCTACGGCAGGATGATGTTGTGCTCGGACAACAGTGTGGAGAGGGATCATTCGGAAAAGTGTACCTAGGAACTGGAAATAATGTTGTTTCTCTGATGGGTGATCGTTTCGGACCGTGTGCTATTAAGATTAATGTAGATGATCCAGCGTCGACTGAGAATCTCAACTATCTCATGGAAGCTAATATTATGAAGAACTTTAAGACTAACTTTATCGTCAAACTGTACGGAGTTATCTCTACTGTACAACCAGCGATGGTTGTGATGGAAATGATGGATCTTGGAAATCTCCGTGACTATCTCCGATCGAAACGCGAAGACGAAGTGTTCAATGAGACGGACTGCAACTTTTTCGACATAATCCCGAGGGATAAATTCCATGAGTGGGCCGCACAGATTTGTGATGGTATGGCGTACCTGGAGTCGCTCAAGTTTTGCCATCGAGATCTCGCCGCACGTAATTGCATGATAAATCGGGATGAGACTGTCAAGATTGGAGATTTCGGAATGGCTCGTGATCTATTCTATCATGACTATTATAAGCCATCGGGCAAGCGTATGATGCCTGTTCGATGGATGTCACCCGAGTCGTTGAAAGACGGAAAGTTTGACTCGAAATCTGATGTTTGGAGCTTCGGAGTTGTTCTCTATGAAATGGTTACACTCGGTGCTCAGCCATATATTGGTTTGAGTAATGATGAGGTGTTGAATTATATTGGAATGGCCCGGAAGGTTATCAAGAAGCCCGAATGTTGTGAAAACTATTGGTATAAGGTGATGAAAATGTGCTGGAGATACTCACCTCGGGATCGTCCGACGTTCCTCCAGCTCGTTCATCTTCTAGCAGCTGAAGCTTCACCAGAATTCCGAGATTTATCATTTGTCCTAACCGATAATCAAATGATCCTTGACGATTCAGAAGCACTGGATCTTGATGATATTGATGATACTGATATGAATGATCAGGTTGTCGAGGTGGCACCGGATGTTGAGAACGTCGAGGTTCAGAGTGATTCGGAACGTCGGAATACGGATTCAATACCGTTGAAACAGTTTAAGACGATCCCTCCGATCAATGCGACGACGAGTCATTCGACAATATCGATTGATGAGACACCGATGAAAGCGAAGCAGCGAGAAGGATCGCTGGATGAGGAGTACGCATTGATGAATCATAGTGGAGGTCCGAGTGATGCGGAAGTTCGGACGTATGCTGGTGATGGAGATTATGTGGAGAGAGATGTTCGAGAGAATGATGTGCCAACG | |||
| Experiment | Laboratory | WD | |||
| Date | 08 Jul 2012 00:00:00 | ||||
| Genotype | ppw-1(pk1425) | ||||
| Treatment | Worms were fed RNAi bacteria from the L1 stage. L4 stage worms were irradiated with 60 Gy ionizing radiation, incubated at 20 degrees Celsius for 24 hours and germ cell apoptosis was quantified. | ||||
| Delivered_by | Bacterial_feeding | ||||
| Inhibits | Predicted_gene | Y55D5A.5e | Inferred_automatically | RNAi_primary | |
| Y55D5A.5g | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5f | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5c | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5d | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5a | Inferred_automatically | RNAi_primary | |||
| Gene | WBGene00000898 | Inferred_automatically | RNAi_primary | ||
| Transcript | Y55D5A.5g.1 | Inferred_automatically | RNAi_primary | ||
| Y55D5A.5e.1 | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5b | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5f.1 | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5a.1 | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5c.1 | Inferred_automatically | RNAi_primary | |||
| Y55D5A.5d.1 | Inferred_automatically | RNAi_primary | |||
| Species | Caenorhabditis elegans | ||||
| Reference | WBPaper00041495 | ||||
| Phenotype_not_observed | WBPhenotype:0000737 | Remark | daf-2 RNAi did not affect the number of apoptotic germ cell corpses following ionizing radiation in the ppw-1(pk1425) mutant background, suggesting that germline DAF-2 is sufficient to promote germ cell apoptosis in response to ionizing radiation | ||
| WBPhenotype:0002045 | Remark | daf-2 RNAi did not affect the number of apoptotic germ cell corpses following ionizing radiation in the ppw-1(pk1425) mutant background, suggesting that germline DAF-2 is sufficient to promote germ cell apoptosis in response to ionizing radiation | |||
| Remark | (Figure 7b) daf-2 (exon 14) RNAi | ||||
| Method | RNAi |
