WormBase Tree Display for RNAi: WBRNAi00078064
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| WBRNAi00078064 | Homol | Homol_homol | F41C6:RNAi | ||
|---|---|---|---|---|---|
| Sequence_info | DNA_text | aaaaagaacaagaaaaataaactagattggatcaggagtcacacggattcagagattggaggagtaattttggatcatataaatgagaagttgatgaaattgggtatataaaaaattaaattaaaataattctgaaaatcaaaagttcgtttttttcagtatctgtgtgacgtaatctctgggcattgtccaagtttatcttttttcgagaagcgtagtacctgaaaataggaagtatagtaatgtgcaaatactagtttcaaaattgtttgaatgcatatgggttataaatttgattgtgatgcctcaagtttttataagttaatttgttcctaagaaactatttatgtaaagtttatgtatacggggcagcgcagtttggcctgcaattgtctgcactgtttgagccttgcaagcccaattattaatggtttcgttcatataagataatcttattgttaatttcatgaacggcaaagtaagcttatgtcagttttaatcagtgttaacgtgattcactaactcgacgcaatatttcaaaatataaccaactttggcaacttcataaatgccaaaaagttgaaaaaaaaagtttgttgaaattggataacctttgttacaaagttactcaagtttgatggaaagttacggaaaggtacaattaattaagaaattggaaaaattggttaaaatttgcagcgcatcgccgagatccttttgttttttctgctaaatttattaaagtaattttgaatgtccctgttcttaccttatccataatatcgtcctcccattccaccaatacagtctgtggattgaccatcaatccatcgcgctcgtgatcggaatcattcttgcctgaaacattcaaaatcagttatcagattagcttccctgtctgtctattgtttcacgcctaatccatactgtcacatttcacacttcgaggcggcatgtccagcgggggcctacgcgcttaattagcatttttgaaggcatttatcattggggtactaactacccccgtttctcctactcctcctcccttcgtggggtgttttctcggacaaaacaaaatggacatcacatcaaacaaaagacaattggaaattgaatgggatgtgtaatgaactcaccaaggaggagataacggcgtccgacgcggagctttgggcacttgcaaatgacaccttgaggggaaatccacaatgatgtttcgccacgttgcatgttctcggtgcctcgtttgaaaactgattcaaccacaatcttgtacttggcccatccatcaaccatctcacggctgaccacaaccatctggacagctaaaaatacagaaaattattaggaaaattcgaattgaagaaaaaaaaaataccatgatcccgcttgcagaacttcttctggttgagtctcttcggaacaattctgcacttcgaacactgatctgaaacgtcacttttgttcaacgtgaatcaatttacaaatatttgcttatagttagtcttcgaaggacattatgttcagggctaactatacatttatttgcttaccttgctcttctgaatgtgatgatccaatgaaatcagctttggtcggaatttctgaaaagaaggttggtgttcaaatgacatgtgtaatttgatttttgtttggagactttgaggctcgatgttccaattcatttcttctagaaaggtgtgattgaaaaggcaagtctcagattaccactttgaatcaacaaaaggttattatgcaaatgtcaagtctaccaaactatgtatgtaattttttaaactgaatactcactgatacacggagtaactgtagaacggctttgttggtatcctttggcacaacgattacaggttgttccagtgactccaggcttgcagacgcactgacccgatgattggttgcagctttttccaagtgatccgactggatgacatccacaagcttaagtggttttgaatttagtatggattactattcaggaaaatatagaagcatgtactgtattttctctagaagacctcatggtacaactttgacagctcatacctcagttgtcaagtgttctttttaaaatttaccaaccgcaaaatatgttttatttcttttctatagtttgttcagcaattgtttattggaatactcaatattaaccgaattataatctttcaaagtaaaaacattaacggaaatacgatagttcaaccatttgctgctactagtaatgatttttcaaacgaccccttgatctgttttaatctcctggttgttccacttttccccaatcttatctttccaataaatctcaatttgctgctcgaccaattaaaaatcattcggcaacattgttcgttgagtgacatgcacacatatcggtgtgattgttgcgacacgtacccttttcactctttctcttcttattttctgtttcttttccccaatcttattcatttcgaaaagccacataaatcttatcaaacaaatgagaagataggtagaatgcaatgcaatcatctcatccagatacaccacaccgaacagcaatttgtccgcaagtctccaacgctttttgataaatgtgctgctctgatgagcatcacaagttgttgtggagcaactggtgtggaaaaaaagaggatacggtaatttgacatccgacaagtgcatttgtttgagataacttggttttatgtttttcagcaagcctaattagatagtgtctttttgtactatacttccttttccccatctactccttttggtaaaagcaatgtttgttggtaattgcggcagaggtgagaaattgaggcattatgaggtgagtgatgatgtgcgtattatgcaatcgtcgtcgattccatattctattcgcgtcggtgaccatccaaggacaaaaaagaggaaacgatcccttttgggtgtatattggcgggaaatggaagcgcttcttgtttcccatgtcttttgtatttgttttgtctaatagcacattaagccctgcctgaccaaaaagtattgaagcgtaaagtccgcagatggatgtggtgataaatttgttttttttttgttcacaacgaggagaagcaatgatgaagcaaatgggttgaacagcggaaaaaaaggtgttaatttatattttatacagctgaattttgaccatgcaaaatctagatctgacggaaaaagaaatctaattatttttttttgctgagcagtattgatgtaagctcaactcaatcgaaatataccccatatagctagttattgctaaaaaatacagtaaccgtgctttgcaccccgctccccccccccccccccgtcacaagctttctattttttacctactggtcagtcagcacttttttcaactttttcttaacgttgcctttaaatctaatcaacacagaaaactacaaagtaactatccgtgtggtcactttttgtccactccttcttgttctcttcactaaattccaatttcggcaacaaacacacaccgaaattcgatttgccctcttctccttctctcctggcggcttctagaagttttgaaggatgggctgtgaagaagtagacggagaagaaacaattgtaggggcggaagggaggatgaaaatcagcggaagcaaagtgctatacaatcggacgtggtcactcgagagctcacggaagaatggctaccaccagatgagagatgtgtttcaattacgcaacattggtgcttgagaagggtgcttaaatttggagcccctccggagtctaggaaattagtcgcgttataggtgggcaatggatcttgacatgtaccacttgtaggaacctcttaagattttcactgttttttatatggccttgttggtcttggaaagcagttcaaagtaagataggaaaaaatgttgcggttggtctccttggtcccctgggtcacagaaacaagaatacactacaaaaaggcgcctggcaaggagtcggctgataaatgacttttcgacgccttggacgaccggaacttacatttacaagctttccgatgtgtcattggcagagaagtatcacggacaaatcctggtttgcagagatgacaatttcttccagcagtgttatgacgacagttcaagcacactcctcctgatctaaaaatttaaaagtttgtattttccgtcagttgtaattgatggctaaccggttgccacttagtctaaagagctcagcatcgaatcggcatctctttgcgtgttggttgcagttgcaagctggaattttcaattcatcattcaataatcccgcgcgctcatgcttccatcctctccagtatatttacaaccgtctggctattaatctcgcagtaattcatgcaagcacatgtctttgtatgcctaccgtaggaatgttcatcttcttcacacatccattaaacacccttatttctcgaatcatgccatcatacaacctcaatcaaaaccaaaaatgggcaacagatggaagaactttcaccatcgccaccttttcactgactattcacacctcgttcgtcatacatagttaatccaatatattgtcagggggtggcggcgggggaccctatattcggacggttgtttgtacatcgcctaatacaggggttcggaacaatgtacctttaacgcgcatcacctgtgtgtgcatatgaaacaagggaacggagcaaaacaagttagaggacaagaaacacaaagcttctttcagtttttaaatctacttgttgaccagatgtttcttaggatagagttttatcaaattagcaaaaagagctttcttcaatgttttctagaaagccaccgacaaggttctaagactatttcgagtaggtacttgtctttctttctttttcgcgacagaagcaacacaaatcagatgcgctttttgaccgattggaagccgtacggaatatcattataatcgttatttgattatgattcgcgtttcggcgctgttttcatttgttttttgatagcatcatcagttttaattatctggtcgaaaagtccatctggatttcattttctcatttcctccattttattcaatataaaatcccgatagaaagtgcgacttccaaaagctgttcaaaatttgaaagaaggttaacacaaaagtgaagagataccccgtggtgttctcgcgcattgtactcgttgacatttgtaatgagatggaacggatcgcattggcattaatatccattgagatatggaacgcgcgagacttttgtatatgtttgagaaacaactaatcggctgagtgcgcgaaaacagtagtcgagagacggacttttacctccgtctccatgacccttccctcttcccatgtcccattgcttaccgacacatgagttggcagaatttgcggtggctcttccccatggacgatcgtaatggaatggtttgcacatttcgcattcagttccggcagtgttatgcttgcagtcacaagtgtactgaaaaaaagaaacatgttcgtgtacatgagtaatgggcgagaaaaataagaaaggtattgatgactaagtgagtgcttacccggcccattttgtcaaagatgcatctactggcgtgaccattacatttgcagcgaccaccaactgccagttctcccattgagtagaagtaacgttgtttgacttcatcatccgtctcgtttccgtacgaattgacatcgttagacaagccatacagttcagcctgaaatgtttttattttcataaagttttgataaacttcaaaagtgttacctgatctggactaagccttgaaaacaccactttaatgtcagttgcggtgacccaatcctgaagcaccggcgagttttcgaagttttgtgcagaaggtctgttctctagaaaagggaacgctacacggtttcctcctggacccattatatgagaggcagtacaaacggcttcttgctcgtttgactttgttatcgacacgtcgggatctctgccaaatatacgacgacattcggaggagtagaattgaaacggggtccaggtctttccaaagtcagcagacttgtaaagtgccattgaatctgggagacgggaacagaagtgcattgagacgtaagtgagctcaaacttttttccgagtgacaaagtgagtgaaacgttttgtgggctcaaacttggagtggaaacccagcatgtcatgtttc | |||
| Experiment | Laboratory | NK | |||
| Date | 16 Oct 2008 00:00:00 | ||||
| Genotype | egl-17>mrfp::rde-1; rde-1(ne219) | ||||
| Treatment | The genetic background, egl-17>mrfp::rde-1; rde-1(ne219), causes primary vulval precursor cell cell-specific RNAi-mediated knockdown. Because in the unc-6(ev400) mutant, the anchor cell fails to invade, the authors suggest this means that UNC-6 is not the vulval cue, but rather a VNC-derived signal that promotes anchor cell invasion. | ||||
| Delivered_by | Bacterial_feeding | ||||
| Inhibits | Predicted_gene | F41C6.1 | Inferred_automatically | RNAi_primary | |
| Gene | WBGene00006746 | Inferred_automatically | RNAi_primary | ||
| Transcript | F41C6.1.1 | Inferred_automatically | RNAi_primary | ||
| F41C6.1.2 | Inferred_automatically | RNAi_primary | |||
| Species | Caenorhabditis elegans | ||||
| Reference | WBPaper00032446 | ||||
| Phenotype_not_observed | WBPhenotype:0001652 | Remark | The genetic background, egl-17>mrfp::rde-1; rde-1(ne219), causes primary vulval precursor cell cell-specific RNAi-mediated knockdown. Because in the unc-6(ev400) mutant, the anchor cell fails to invade, the authors suggest this means that UNC-6 is not the vulval cue, but rather a VNC-derived signal that promotes anchor cell invasion. | ||
| Remark | The genetic background, egl-17>mrfp::rde-1; rde-1(ne219), causes primary vulval precursor cell cell-specific RNAi-mediated knockdown. Because in the unc-6(ev400) mutant, the anchor cell fails to invade, the authors suggest this means that UNC-6 is not the vulval cue, but rather a VNC-derived signal that promotes anchor cell invasion. | ||||
| Method | RNAi |
