WormBase Tree Display for RNAi: WBRNAi00066002
expand all nodes | collapse all nodes | view schema
| WBRNAi00066002 | Homol | Homol_homol | F31E3:RNAi | ||
|---|---|---|---|---|---|
| Sequence_info | DNA_text | aaaagagttcgcaattccctggttcgagcatctcttcctacctgaatttccaactcgaagtgttatcaacgagaaaagttttgtggtaggaactattttcattcacttatttttttttcaaaatgaaatataatttcagttagaaagacagcttggtcgtggttcatttggtgttgtttattgtgccagtgcaattcatgattcagagaggaagtttgctatcaaaatgcaagaaaaaagggagatcatttcaaaacgagccgttttacaggtcaaacgagaagctagtatacaggtttgccagcaagacgttacatccgatcattcacattttcagcgtcttcttccttctcatccattcatcgccagaacttattctacgtggcagacacgtactcatctctattctttactacagtacccaactggttcaactggtgacttgttttcagtatggaggcaacggggatctctttcagaagctgctattaggttgattggagcagagttagcatcagctattggtaatataataacggttatgtaagaaattcggtgttttattttcagatttcctacaccagaatgacgtgatctatcgagatgtaaaactggaaaatgtagttctagatcaatggggtcacgccttgctaattgattttggtttggcaaaaaagctgaaacaaggttctagtaccggaacaatatgtggaacattacaatacatgtcacctgacgtggcatctggtggaacatattctcattatgttgattggtggtcattaggtgtactcttgcatattttattaactggaatatatccatatccaaattcagaagccacacatcatgctaatttaaagtaagttcacatcacagattttagaataatctcttatgcttttcagattcattgactacagtactcctataggatgttcacgtgaattcgccaaccttatggatagagtgagttcagaaactcggaaaaaaacgttaatatcattagtttcagatgttagcagtttccataacccatcgtttatgctcattcactgttcttcacgcccatccatttttccgatccattgacttttcgaaattggaacaaaaagattacacacctgcagcggaaattggtaacgctgaatatgatacttatcacaaaagtgaggacgcgttggatgatgctttgttcaaggaaaattatgatgtgagttgcggaagaaatgtaatttttgcagtattgccggttttttggtaatctgccaaattattgaaaaattgaactttttgagaaactcggtgcattcttgcatgtttaaattctacaatttttgaatatttattcatcagttaaatataaaactgtgaaaatattttttcgatcgacttccaatattatgaaaggtgaaaactgagtaattgccattttgacagcaaattaaaatttcactatctgacctcaaaaactaaatatgcaaatcaaatattatatttcagttcgaccgttttgactatttcaatgatcgattctaatgtgatgcatatcgatttgagggttggaatgaaaacgagctctttttattgctccgtcactctcttttactctgtgataaaataccctgttaccatcatcatcaattcacttttctgtatgatacgggcgctaataaatattttacaacatgcttgatttcccacagatttcgtttaaacatatatcataaccatcaaatgggatgttctacatgtagaacaaattatactttcttccaataaatacagaattaaaaatttcctaaataaatatgaactgttttgggattttttacacttattttcaaggctgcgataagaacggtcaaactttcataaaaaattgaaatatctggaaaagtggagatacaagcagtactcagtaataccctgaagcttattttatttcctagttaggtgttaaatatttcttaagctaagaatttcgtaaatcgatttatttataaatctagctatgtaaacatagtcatggagatatgcctacattcctacgcattcgatgcagctgagggtttggcagatttcctttaacttgatgatcgtaaccttttcaactccttcgcaaaaaaatagggtaaccgtaaatgcataaatctacccttatctaggtaccatcaaatagctcacgcataagataggaatctgacaatagtatgaaaacattactgagaagcttactttcggtcttcagtgtagaaacataaataccttcctttgggccgtctacgtctaatttgtcgttaggccgttactcggtattcaaaacgagttacacccacggtaggcacgcagatgggcctttccgtaactgagtggaagatactcgatttagcacttaatttactgtatattttctgattcaaattctagaccactatgtatttcttcaactcatcaatcattccccgcttctcactttaaaaaaaaaataataataacaatatggttgagttgacccaaagccgtaacaacaacggtcatttccatcggctggctgtgtggtcgagggaaggatccattacaatcgcaataaatgcggattcaaagcgcaaaatccctgcgtctcccttcaattgttcaatgtctaatagttcttctggcagatgatacgtcctcacaacatctggcctttccttccttccactgctacaaacacacatagcaaaggtcatctcctgatgtctctaggtctcttcgagtaaatgaagagggtctttctctgttgtttcgaaggaaccgctacgctgacacgcgacgcacgtcaaatgtcaacttgtcttcgttcgacgtctccccccaacgtcgttttcgtgtatatccatcttttttcgagacgtttttattccgtttttgcggaagggtgttgttttgagttattgatccctttgtttttcgacaagaaccgtttgatgtaaaagttaatatcaagtgacagatcctgatggatcctgtcagattatggtaggatagtatactttttatagtgagtgaactgacactaggttggcaagagtatacctatctacacatttgctcaaacaaaaataaccttactacaataatgggaagcgctagaaattgtgcaaccaccgacctaacacatcttattttacgcacaattttggctccattacggcctgcccaaatattcgtggtataatagaatctatgtctattccatacattatggctatactaaaatgtcgaaataagattttgaattctatttttttaatcaaaagttattttactattcagttttcacttatcaaatgtttatcataataaactatcttcaaatctgactttctttgaaatttcgatcctaccacatgaggcaatgtatttttgggaaaattcacaccagatcttccgaacacctactaattcaaggtcatttcctcttctttgtttctaaatttctccttcaaaactttcagtttttaattcaaatttttaacttttttttagaatctaattattaatttcagaaaatggtggggacacacccagccaatctcagcgagcttttagacgccgtcttgaaaataaatgagcaaactttggatgataatgacagtgcaaagtgagttttttgtttttagtttttgagatttggtttttgaaagaaattcagaagacgagccataatttttggagatctagaaagttgttttcaattttagtaatagtttgtgaaaatattcaaaaatgataaaatttttgagaacatctccacagtatattttccaaaacctaaaattttatttctttcagaaaacaagagctacaatgtcatcccatgcgtcaagccctattcgatgttctctgtgaaacaaaagaaaaaacagtactgacagttcgtaatcaagtggacgaaactccagaagatcctcaattaatgcgacttgataatatgttagtggcggaaggcgttgcaggaccagataaaggaggttcattaggaagtgatgcaagtggaggtgatcaggctgattatagacaaaagcttcaccagattcgagttttgtacaatgaagagctgagaaagtatgaggaggtacgctattttcaaaagcaaaaactcagatctgactcaacattgtttaattgaaatttagttttttttgtgagtgttcgcgaaaaaaaaggtccgaataaaaactaaaaatattttttcaggcttgtaacgaattcacgcaacacgtgaggtctctgctgaaggatcaatcacaagttcgcccaatagcacataaggaaatcgaacgaatggtttatataatccaacgaaaattcaatggaattcaagttcaactcaaacaatccacatgtgaggccgtcatgatcctcagaagcaggttccttgatgcccgccgtaaacggcgaaacttttcgaaacaagcgacagaagtgcttaatgaatatttctatggacacctctcaaatccatacccatcagaagaagcaaaagaagatctcgcaaggcagtgcaatattacagtatctcaggtatcattataaaatttattcgttttttttgcatagtacctatcgaaggctctatataataagtcttgctcaaattttttagaatagctattaatagttctattcatttcggacgtaatgaaactatgaattattctgaatgttcacaactttgtcatattttttgtggcagtcgaaaatgataatgaaaatgtttagaaaataattttttaaaaacattgtcacaccttaaacttttttttcaaaatgttcactttcaggtttccaattggtttggaaataaacgaattcgctacaagaaaaatatggcaaaagctcaagaggaagccagtatgtatgctgccaaaaagaatgctcatgtaacattaggaggtatggctggaaatccatacggaatgcttcctggtgctgcagccgctgctggcctattaaatccctacaatcctatgaatattcccggacaagacacattgcatatgggaatgccaccctttgatttatcggtatataatccacaattggtgagtactattagtctttacagtttcaattttaaatactctctttccagatggccgcagctcaataccaacaacaaatggacaatgctgataaaaattcataaataatactcagccagttggtaatattgaaatctcaaccaatcatcccatctaccatcacacaatcttgctttcttctcaatcgaattcccgatcaatctcgttctggttattctgttagaccatcgacttttttgtatttttctttccaaccagcttgtcctttcttgaattttttacttgcacagacaca | yk219d9 | ||
| Sequence | yk219d9 | ||||
| Experiment | Laboratory | FR | |||
| Date | 30 Sep 2006 00:00:00 | ||||
| Strain | WBStrain00000001 | ||||
| Delivered_by | Bacterial_feeding | ||||
| Inhibits | Predicted_gene | F31E3.2b | Inferred_automatically | RNAi_primary | |
| F31E3.2a | Inferred_automatically | RNAi_primary | |||
| F31E3.1 | Inferred_automatically | RNAi_primary | |||
| Gene | WBGene00017950 | Inferred_automatically | RNAi_primary | ||
| WBGene00000443 | Inferred_automatically | RNAi_primary | |||
| Transcript | F31E3.2b.1 | Inferred_automatically | RNAi_primary | ||
| F31E3.2a.1 | Inferred_automatically | RNAi_primary | |||
| F31E3.2c.1 | Inferred_automatically | RNAi_primary | |||
| F31E3.1.1 | Inferred_automatically | RNAi_primary | |||
| Species | Caenorhabditis elegans | ||||
| Reference | WBPaper00028766 | ||||
| Phenotype | WBPhenotype:0000220 | Remark | failure to execute secondary vulval cell fate | ||
| WBPhenotype:0000700 | Penetrance | Low | |||
| Range | 10 | ||||
| Remark | Entire sequence of clone used for RNAi not known as only the ends of the sequence were determined. The only target shown is the best match. | ||||
| Method | RNAi |
