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WormBase Tree Display for Gene: WBGene00305170

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Name Class

WBGene00305170SMapS_parentSequencePPA_ChrII
IdentityVersion4
NameCGC_namePpa-mecr-1From_analysisInferred_from_orthology
Sequence_namePPA47276
Molecular_namePPA47276
PPA47276.1
PP75742
Public_namePpa-mecr-1
SpeciesPristionchus pacificus
HistoryVersion_change121 Nov 2019 15:18:34WBPerson4055EventSplit_fromWBGene00097770
204 Feb 2020 15:43:56WBPerson1983Name_changeCGC_namePpa-mecr-1
328 May 2021 19:05:21WBPerson1983Name_changeCGC_nameRemoved
428 Jul 2021 11:12:28WBPerson1983Name_changeCGC_namePpa-mecr-1
Split_fromWBGene00097770
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmecr
RNASeq_FPKMWBls:000003215.5197From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010115.5197From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
37.253From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
96.2392From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00303574
Ortholog (51)
ParalogWBGene00094847Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00095833Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00106856Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00112604Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00113508Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00274173Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00275879Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00304442Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable oxidoreductase activity. Is an ortholog of C. elegans mecr-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA47276
Corresponding_transcriptPPA47276.1
Other_sequence (54)
Experimental_infoMicroarray_resultsGPL14372_Probes_90569
GPL14372_Probes_90570
GPL14372_Probes_90571
GPL14372_Probes_90572
Remark[210528 pad] The CGC name Ppa-mecr-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene