WormBase Tree Display for Gene: WBGene00246876

WBGene00246876 SMap: S_parent: Sequence: OVOC_OM4_49
  Identity: Version: 3
    Name: Sequence_name: OVOC10067
      Molecular_name: OVOC10067
        OVOC10067.1
        OVP13228
      Public_name: OVOC10067
    Species: Onchocerca volvulus
    History: Version_change: 1 29 Nov 2013 15:05:34 WBPerson3111 Event: Imported: MAKER import
        2 06 Mar 2014 15:48:13 WBPerson2062 Event: Acquires_merge: WBGene00246875
        3 06 Mar 2014 15:48:13 WBPerson2062 Event: Acquires_merge: WBGene00246877
      Acquires_merge: WBGene00246875
        WBGene00246877
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000101 11.3311 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_median
        12.1945 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_mean
      WBls:0000104 (16)
      WBls:0000107 20.2613 From_analysis: RNASeq.ovolvulus.WBls:0000107.control_mean
            RNASeq.ovolvulus.WBls:0000107.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
      WBls:0000108 11.0891 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
        27.1056 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_mean
        29.8686 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
        40.3592 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
      WBls:0000664 0.355744 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
        3.56348 From_analysis: RNASeq.ovolvulus.WBls:0000664.control_mean
            RNASeq.ovolvulus.WBls:0000664.control_median
        6.77121 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
    Ortholog (65)
    Paralog: WBGene00237056 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00240474 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00240803 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00241569 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00242009 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00242174 Onchocerca volvulus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Immunoglobulin I-set domain; Immunoglobulin-like domain superfamily; EGF-like domain; Laminin EGF domain; Laminin-type EGF domain; Immunoglobulin subtype 2; Concanavalin A-like lectin/glucanase domain superfamily; Low-density lipoprotein (LDL) receptor class A repeat; Immunoglobulin I-set; Immunoglobulin-like domain; Laminin IV; Immunoglobulin domain; LDL receptor-like superfamily; Laminin G domain; Laminin B (Domain IV); Immunoglobulin-like fold; Growth factor receptor cysteine-rich domain superfamily; Low-density lipoprotein receptor domain class A; and Immunoglobulin subtype. Is an ortholog of C. elegans unc-52. In C. elegans, unc-52 is involved in several processes, including hemidesmosome assembly; muscle cell cellular homeostasis; and muscle structure development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: OVOC10067
    Corresponding_CDS_history: OVOC10067:ov242
    Corresponding_transcript: OVOC10067.1
    Other_sequence (172)
  Experimental_info: Expression_cluster: WBPaper00048881:immunoreactive
  Reference: WBPaper00048750
    WBPaper00056743
  Method: Gene