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WormBase Tree Display for Gene: WBGene00246397

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Name Class

WBGene00246397SMapS_parentSequenceOVOC_OM3_145
IdentityVersion2
NameCGC_nameOvo-unc-47From_analysisInferred_from_orthology
Sequence_nameOVOC9588
Molecular_nameOVOC9588
OVOC9588.1
OVP02260
Public_nameOvo-unc-47
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:34WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:33WBPerson4055Name_changeCGC_nameOvo-unc-47
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00001010.073548From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
1.77767From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:00001040.033783From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
0.064991From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
0.082104From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
0.157417From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
0.16099From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
0.917602From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
0From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
5.42081From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
7.84394From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
WBls:00001077.57538From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001084.48192From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
5.15078From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
5.18539From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
5.78503From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:00006641.04948From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
1.15848From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
1.26747From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
OrthologWBGene00156535Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00031320Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00226131Brugia malayiFrom_analysisWormBase-Compara
WBGene00006783Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00131875Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g5282Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g16367Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g17494Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP29.g23252Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g8831Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5920Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g3817Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g17863Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g8062Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00298.g8759Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-47Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_00155.g5830Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_19538Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_009607Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08109Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g22481Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30209100Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00054935Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrIII_pilon.g8813Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00261409Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00286618Trichuris murisFrom_analysisWormBase-Compara
WBGene00290247Trichuris murisFrom_analysisWormBase-Compara
WBGene00290249Trichuris murisFrom_analysisWormBase-Compara
WBGene00290965Trichuris murisFrom_analysisWormBase-Compara
WBGene00301830Trichuris murisFrom_analysisWormBase-Compara
WBGene00301832Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00236843Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00243228Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245562Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245651Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246496Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246592Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247232Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247233Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247296Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Amino acid transporter, transmembrane domain and Transmembrane amino acid transporter protein. Is an ortholog of C. elegans unc-47.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC9588
Corresponding_transcriptOVOC9588.1
Other_sequence (15)
MethodGene