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WormBase Tree Display for Gene: WBGene00244389

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Name Class

WBGene00244389SMapS_parentSequenceOVOC_OM3_23
IdentityVersion1
NameSequence_nameOVOC7580
Molecular_nameOVOC7580
OVOC7580.1
OVP08536
Public_nameOVOC7580
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00001010.446672From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
1.94523From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:00001040.275087From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
0.328277From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
0.422538From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
0.565067From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
0.673659From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
0.717803From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
1.3094From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
0From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
2.46878From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
WBls:00001072.44876From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010813.4649From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
13.7742From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
1.56064From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
9.59991From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
WBls:00006641.80348From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
2.60429From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
3.4051From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
OrthologWBGene00158228Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00027983Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00223829Brugia malayiFrom_analysisWormBase-Compara
WBGene00006812Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00122691Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g2227Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g16091Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g7029Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g7952Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g20590Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g7280Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g1186Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g2252Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9934Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g7116Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g20767Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g1938Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00892.g14782Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00892.g14787Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_02666.g17407Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_02666.g17408Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_03452.g18097Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_03620.g18234Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_12140.g23586Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-80Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g21785Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02725.g27697Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_02725.g27698Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_02725.g27699Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03494.g30373Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_04303.g32591Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_04303.g32592Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_07000.g37259Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_19881Caenorhabditis latensFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07312Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g5617Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50426200Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00063566Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00107425Pristionchus pacificusFrom_analysisWormBase-Compara
chrV_pilon.g18189Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00294580Trichuris murisFrom_analysisWormBase-Compara
WBGene00296023Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00244388Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Cation channel complex component UNC80, N-terminal and UNC80 N-terminal. Is an ortholog of C. elegans unc-80. In C. elegans, unc-80 is involved in several processes, including monoatomic cation homeostasis; positive regulation of locomotion; and response to anesthetic.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC7580
Corresponding_transcriptOVOC7580.1
Other_sequenceDviv_isotig25731
JI168394.1
Acan_isotig21033
JI168396.1
Experimental_infoExpression_clusterWBPaper00050764:Ov-L3D3_enriched
MethodGene